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ImperialCollegeLondon/covid19model: Nature, 2020 https://www.nature.com/articles/s41586-020-2405-7

Swapnil Mishra; Fabian Valka


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    "description": "<p>This code is the exact code that was used in Flaxman, Mishra, Gandy et al. &quot;Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe,&quot; Nature, 2020. <a href=\"https://www.nature.com/articles/s41586-020-2405-7\">https://www.nature.com/articles/s41586-020-2405-7</a></p>\n\n<p>To run the code from the main folder in Rstudio <code>source(&quot;base-nature.r&quot;)</code> or from the command line <code>Rscript base-nature.r</code>.</p>\n\n<p>The code should be run in full mode to obtain results---debug mode is only to check that your environment has the required libraries; results will not be reliable as the MCMC chains will not have converged.</p>\n\n<p>The repository with posterior draws of the model in Flaxman, Mishra, Gandy et al. &quot;Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe,&quot; Nature, 2020. <a href=\"https://www.nature.com/articles/s41586-020-2405-7\">https://www.nature.com/articles/s41586-020-2405-7</a> is <a href=\"https://github.com/ImperialCollegeLondon/covid19modelnaturedraws\">here</a>.</p>\n\n<p>This code doesn&#39;t supersede our earlier model, it is here for everyone to have direct access to code used in Flaxman, Mishra, Gandy et al. &quot;Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe,&quot; Nature, 2020.<a href=\"https://www.nature.com/articles/s41586-020-2405-7\">https://www.nature.com/articles/s41586-020-2405-7</a>.</p>\n\n<p>The instructions for European, Italy, Brazil, and USA code are the same as earlier (Look at version 3, version 4, version 5, version 6).</p>", 
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