There is a newer version of this record available.

Software Open Access

ImperialCollegeLondon/covid19model: Nature, 2020 https://www.nature.com/articles/s41586-020-2405-7

Swapnil Mishra; Fabian Valka


DCAT Export

<?xml version='1.0' encoding='utf-8'?>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:adms="http://www.w3.org/ns/adms#" xmlns:cnt="http://www.w3.org/2011/content#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:dctype="http://purl.org/dc/dcmitype/" xmlns:dcat="http://www.w3.org/ns/dcat#" xmlns:duv="http://www.w3.org/ns/duv#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:frapo="http://purl.org/cerif/frapo/" xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#" xmlns:gsp="http://www.opengis.net/ont/geosparql#" xmlns:locn="http://www.w3.org/ns/locn#" xmlns:org="http://www.w3.org/ns/org#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:prov="http://www.w3.org/ns/prov#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:schema="http://schema.org/" xmlns:skos="http://www.w3.org/2004/02/skos/core#" xmlns:vcard="http://www.w3.org/2006/vcard/ns#" xmlns:wdrs="http://www.w3.org/2007/05/powder-s#">
  <rdf:Description rdf:about="https://doi.org/10.5281/zenodo.3888697">
    <rdf:type rdf:resource="http://www.w3.org/ns/dcat#Dataset"/>
    <dct:type rdf:resource="http://purl.org/dc/dcmitype/Software"/>
    <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://doi.org/10.5281/zenodo.3888697</dct:identifier>
    <foaf:page rdf:resource="https://doi.org/10.5281/zenodo.3888697"/>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Swapnil Mishra</foaf:name>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>Imperial College London, @ MRC Centre for Global Infectious Disease Analysis</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Fabian Valka</foaf:name>
      </rdf:Description>
    </dct:creator>
    <dct:title>ImperialCollegeLondon/covid19model: Nature, 2020 https://www.nature.com/articles/s41586-020-2405-7</dct:title>
    <dct:publisher>
      <foaf:Agent>
        <foaf:name>Zenodo</foaf:name>
      </foaf:Agent>
    </dct:publisher>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#gYear">2020</dct:issued>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#date">2020-06-10</dct:issued>
    <owl:sameAs rdf:resource="https://zenodo.org/record/3888697"/>
    <adms:identifier>
      <adms:Identifier>
        <skos:notation rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/3888697</skos:notation>
      </adms:Identifier>
    </adms:identifier>
    <dct:relation rdf:resource="https://github.com/ImperialCollegeLondon/covid19model/tree/v7.0"/>
    <dct:relation rdf:resource="https://doi.org/10.1038/s41586-020-2405-7"/>
    <dct:isVersionOf rdf:resource="https://doi.org/10.5281/zenodo.3888696"/>
    <dct:isPartOf rdf:resource="https://zenodo.org/communities/covid-19"/>
    <dct:isPartOf rdf:resource="https://zenodo.org/communities/zenodo"/>
    <owl:versionInfo>v7.0</owl:versionInfo>
    <dct:description>&lt;p&gt;This code is the exact code that was used in Flaxman, Mishra, Gandy et al. &amp;quot;Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe,&amp;quot; Nature, 2020. &lt;a href="https://www.nature.com/articles/s41586-020-2405-7"&gt;https://www.nature.com/articles/s41586-020-2405-7&lt;/a&gt;&lt;/p&gt; &lt;p&gt;To run the code from the main folder in Rstudio &lt;code&gt;source(&amp;quot;base-nature.r&amp;quot;)&lt;/code&gt; or from the command line &lt;code&gt;Rscript base-nature.r&lt;/code&gt;.&lt;/p&gt; &lt;p&gt;The code should be run in full mode to obtain results---debug mode is only to check that your environment has the required libraries; results will not be reliable as the MCMC chains will not have converged.&lt;/p&gt; &lt;p&gt;The repository with posterior draws of the model in Flaxman, Mishra, Gandy et al. &amp;quot;Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe,&amp;quot; Nature, 2020. &lt;a href="https://www.nature.com/articles/s41586-020-2405-7"&gt;https://www.nature.com/articles/s41586-020-2405-7&lt;/a&gt; is &lt;a href="https://github.com/ImperialCollegeLondon/covid19modelnaturedraws"&gt;here&lt;/a&gt;.&lt;/p&gt; &lt;p&gt;This code doesn&amp;#39;t supersede our earlier model, it is here for everyone to have direct access to code used in Flaxman, Mishra, Gandy et al. &amp;quot;Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe,&amp;quot; Nature, 2020.&lt;a href="https://www.nature.com/articles/s41586-020-2405-7"&gt;https://www.nature.com/articles/s41586-020-2405-7&lt;/a&gt;.&lt;/p&gt; &lt;p&gt;The instructions for European, Italy, Brazil, and USA code are the same as earlier (Look at version 3, version 4, version 5, version 6).&lt;/p&gt;</dct:description>
    <dct:accessRights rdf:resource="http://publications.europa.eu/resource/authority/access-right/PUBLIC"/>
    <dct:accessRights>
      <dct:RightsStatement rdf:about="info:eu-repo/semantics/openAccess">
        <rdfs:label>Open Access</rdfs:label>
      </dct:RightsStatement>
    </dct:accessRights>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3888697"/>
      </dcat:Distribution>
    </dcat:distribution>
  </rdf:Description>
</rdf:RDF>
462
19
views
downloads
All versions This version
Views 462382
Downloads 1915
Data volume 286.4 MB221.6 MB
Unique views 368299
Unique downloads 1915

Share

Cite as