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Cantemist guidelines: neoplasms morphology annotation and mapping to CIEO-3

Farré, Eulàlia; González, Gloria; Krallinger, Martin; Mas, Toni; Miranda-Escalada, Antonio


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  <dc:creator>Farré, Eulàlia</dc:creator>
  <dc:creator>González, Gloria</dc:creator>
  <dc:creator>Krallinger, Martin</dc:creator>
  <dc:creator>Mas, Toni</dc:creator>
  <dc:creator>Miranda-Escalada, Antonio</dc:creator>
  <dc:date>2020-06-05</dc:date>
  <dc:description>Important: CANTEMIST corpus is available at: https://zenodo.org/record/3878488

 

For more information, visit https://temu.bsc.es/cantemist/?p=4362

The Cantemist corpus was manually annotated by clinical experts following the Cantemist guidelines.  These guidelines contain rules for annotating morphology neoplasms in Spanish oncology clinical cases; as well as for mapping these annotations to CIEO-3 (Spanish version of ICD-O-3).

Guidelines were created de novo by clinical experts in three phases:


	 First, a zero version of guidelines after the clinical experts reviewed neoplasm morphology annotations in SPACCC corpus see Codiesp guidelines(https://zenodo.org/record/3730567).
	 Second, a stable version of guidelines was reached while annotating sample sets of Cantemist corpus iteratively until quality control was satisfactory.
	 Third, guidelines are iteratively refined as manual annotation continues.
</dc:description>
  <dc:description>Funded by the Plan de Impulso de las Tecnologías del Lenguaje (Plan TL).</dc:description>
  <dc:identifier>https://zenodo.org/record/3878179</dc:identifier>
  <dc:identifier>10.5281/zenodo.3878179</dc:identifier>
  <dc:identifier>oai:zenodo.org:3878179</dc:identifier>
  <dc:language>spa</dc:language>
  <dc:relation>doi:10.5281/zenodo.3878178</dc:relation>
  <dc:relation>url:https://zenodo.org/communities/medicalnlp</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>https://creativecommons.org/licenses/by/4.0/legalcode</dc:rights>
  <dc:subject>NLP</dc:subject>
  <dc:subject>guidelines</dc:subject>
  <dc:subject>annotatation</dc:subject>
  <dc:subject>clinical</dc:subject>
  <dc:subject>neoplasm morphology</dc:subject>
  <dc:subject>cieo</dc:subject>
  <dc:subject>oncology</dc:subject>
  <dc:subject>NER</dc:subject>
  <dc:subject>normalization</dc:subject>
  <dc:subject>ICD-O</dc:subject>
  <dc:title>Cantemist guidelines: neoplasms morphology annotation and mapping to CIEO-3</dc:title>
  <dc:type>info:eu-repo/semantics/report</dc:type>
  <dc:type>publication-report</dc:type>
</oai_dc:dc>
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