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Dataset Open Access

Ooh Na Na

Charles Tapley Hoyt

This is a gzipped three-column TSV file that has prefixes, identifiers, and names for lots of biomedical entities, drawing from the OBO Foundry, ontologies in the Ontology Lookup Service, and many other nomenclature consortia that just haven't made it to the prime-time of standardized goodness. Ultimate, this dataset helps answer the question: what's my name?

It's really a lot of work to get this stuff, so I tried to make it easy. It was generated with the following code in the shell:

pip install git+https://github.com/pyobo/pyobo.git
obo ooh-na-na

The 1.1.0 version includes the addition of DrugBank, BFO, and Pfam.
Files (202.8 MB)
Name Size
ooh_na_na.tsv.gz
md5:ac157cb5e830632f243eaa2e0cf9be16
202.8 MB Download
ooh_na_na_summary.tsv
md5:91276e8e46e80f6ee694fabdee307c0a
1.2 kB Download
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