nohup: ignoring input + echo 'using elton version 0.9.8' using elton version 0.9.8 + echo -e '\nFor more information, see /home/jhpoelen/tpt-reporting/output/2020-05-22' For more information, see /home/jhpoelen/tpt-reporting/output/2020-05-22 + updateAll + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/plazi-covid19 updating [globalbioticinteractions/plazi-covid19]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\done. + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/pensoft-table updating [globalbioticinteractions/pensoft-table]... -\|/-\|-\|/-\|-\|/done. + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/pensoft-dwca updating [globalbioticinteractions/pensoft-dwca]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\done. + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/pensoft-ipt updating [globalbioticinteractions/pensoft-ipt]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-done. + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/olival2017 updating [globalbioticinteractions/olival2017]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\done. + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/dbatvir updating [globalbioticinteractions/dbatvir]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\done. + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/batplant updating [globalbioticinteractions/batplant]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\done. + for dataset in $DATASETS_UNDER_REVIEW + elton update globalbioticinteractions/ncbi-virus updating [globalbioticinteractions/ncbi-virus]... 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+ for dataset in $DATASETS_UNDER_REVIEW + elton update qgroom/batinterations updating [qgroom/batinterations]... -\|/-\|-\|/-\|-\|done. + reviewDatasets + echo globalbioticinteractions/plazi-covid19 + xargs -L1 elton review --type info,note + gzip -\|creating review [globalbioticinteractions/plazi-covid19]... /-\|-\|/-\|-\|done. + xargs -L1 elton review --no-header --type info,note + tail -n +2 + echo 'globalbioticinteractions/pensoft-table globalbioticinteractions/pensoft-dwca globalbioticinteractions/pensoft-ipt globalbioticinteractions/olival2017 globalbioticinteractions/dbatvir globalbioticinteractions/batplant globalbioticinteractions/ncbi-virus qgroom/batinterations' + gzip -\|creating review [globalbioticinteractions/pensoft-table]... /-\done. -\|creating review [globalbioticinteractions/pensoft-dwca]... /-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|done. -\|creating review [globalbioticinteractions/pensoft-ipt]... /-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\done. -\|creating review [globalbioticinteractions/olival2017]... /-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/done. -\|creating review [globalbioticinteractions/dbatvir]... /-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\done. -\|creating review [globalbioticinteractions/batplant]... /-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-done. -\|creating review [globalbioticinteractions/ncbi-virus]... /-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-done. -\|creating review [qgroom/batinterations]... /-\|done. + echo -e '\n' + echo -e 'institutionCode\tcollectionId\tcollectionCode\tsourceCitation\tdistinctReviewCommentCount\ttype\tcomment' + cat /home/jhpoelen/tpt-reporting/output/2020-05-22/review_comments.tsv.gz + gunzip + tail -n +2 + awk -F '\t' '{ print $9 "\t" $11 "\t" $10 "\t" $14 "\t" $5 "\t" $6 }' + sort + uniq -c + sort -nr + sed -E 's/[ ]*//;s/[ ]/ /' + sed -E 's/ note / issue /g' + awk -F '\t' '{ print $2 "\t" $3 "\t" $4 "\t" $5 "\t" $1 "\t" $6 "\t" $7 }' + sort + echo -e 'distinctReviewCommentCount\ttype\tcomment' + cat /home/jhpoelen/tpt-reporting/output/2020-05-22/review_comments.tsv.gz + gunzip + tail -n +2 + awk -F '\t' '{ print $5 "\t" $6 }' + sort + sed -E 's/ note / issue /g' + uniq -c + sort + sort -nr + sed -E 's/[ ]*//;s/[ ]/ /' + indexInteractionData + echo globalbioticinteractions/plazi-covid19 + xargs -L1 elton interactions + gzip listing interactions [globalbioticinteractions/plazi-covid19]... -\|/-\|-\|/-done. + echo 'globalbioticinteractions/pensoft-table globalbioticinteractions/pensoft-dwca globalbioticinteractions/pensoft-ipt globalbioticinteractions/olival2017 globalbioticinteractions/dbatvir globalbioticinteractions/batplant globalbioticinteractions/ncbi-virus qgroom/batinterations' + xargs -L1 elton interactions --no-header + gzip listing interactions [globalbioticinteractions/pensoft-table]... -\|/done. listing interactions [globalbioticinteractions/pensoft-dwca]... -\|/-\|-\|/-\done. listing interactions [globalbioticinteractions/pensoft-ipt]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\done. listing interactions [globalbioticinteractions/olival2017]... -\|/-\|-\|/-\|-\done. listing interactions [globalbioticinteractions/dbatvir]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-done. listing interactions [globalbioticinteractions/batplant]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|done. listing interactions [globalbioticinteractions/ncbi-virus]... -\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-\|-\|/-done. listing interactions [qgroom/batinterations]... -\|done. + echo -e 'institutionCode\tcollectionId\tcollectionCode\tsourceCitation\tindexedInteractionRecordCount\tinteractionTypeName\tinteractionTypeId' + cat /home/jhpoelen/tpt-reporting/output/2020-05-22/indexed_interactions_full.tsv.gz + gunzip + tail -n +2 + sort + uniq -c + sort -nr + awk -F '\t' '{ print $6 "\t" $5 "\t" $4 "\t" $49 "\t" $20 "\t" $19 }' + sed -E 's/[ ]*//;s/[ ]/ /' + sort + awk -F '\t' '{ print $2 "\t" $3 "\t" $4 "\t" $5 "\t" $1 "\t" $6 "\t" $7 }' + cat /home/jhpoelen/tpt-reporting/output/2020-05-22/indexed_interactions_full.tsv.gz + gunzip + awk -F '\t' '{ print $6 "\t" $5 "\t" $4 "\t" $3 "\t" $8 "\t" $20 "\t" $27 }' + gzip + printReports + echo -e '\n---- distinct review comments by type ----' ---- distinct review comments by type ---- + cat /home/jhpoelen/tpt-reporting/output/2020-05-22/review_summary.tsv distinctReviewCommentCount type comment 10 issue date [0008-01-01T00:00:00Z] occurred in the first century AD 1146 issue found [23] columns, but only [14] columns are defined: ignoring remaining undefined columns. 14 issue date [0009-01-01T00:00:00Z] occurred in the first century AD 18 issue date [0007-01-01T00:00:00Z] occurred in the first century AD 18 issue invalid date string [2013~2015] 1 info [http://130.120.204.55:8080/ipt/archive.do?r=harvestmen_of_french_guiana]: detected [0] interaction record(s) 1 info [http://130.120.204.55:8080/ipt/archive.do?r=harvestmen_of_french_guiana]: indexing interaction records 1 info [http://130.120.204.55:8080/ipt/archive.do?r=harvestmen_of_french_guiana]: scanned [3405] record(s) 1 info [http://ipt.gbif.pt/ipt/archive.do?r=global_database_of_alien_macrofungi]: detected [0] interaction record(s) 1 info [http://ipt.gbif.pt/ipt/archive.do?r=global_database_of_alien_macrofungi]: indexing interaction records 1 info [http://ipt.gbif.pt/ipt/archive.do?r=global_database_of_alien_macrofungi]: scanned [679] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aafc-brassicaceae-checklist]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aafc-brassicaceae-checklist]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=aafc-brassicaceae-checklist]: scanned [14981] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=accipiter_ne_br]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=accipiter_ne_br]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=accipiter_ne_br]: scanned [6] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=acuclavellalocalities_richarthedin]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=acuclavellalocalities_richarthedin]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=acuclavellalocalities_richarthedin]: scanned [284] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=afroheriades]: detected [1] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=afroheriades]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=afroheriades]: scanned [75] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=alloperlaproject]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=alloperlaproject]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=alloperlaproject]: scanned [107] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=altingiaceae_synopsis]: detected [4] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=altingiaceae_synopsis]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=altingiaceae_synopsis]: scanned [928] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amauropelma_matakecil]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amauropelma_matakecil]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=amauropelma_matakecil]: scanned [5] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amphibian_romania]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amphibian_romania]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=amphibian_romania]: scanned [25675] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ancyronyx_mindoro_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ancyronyx_mindoro_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ancyronyx_mindoro_data]: scanned [539] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=annotated_checklist_for_stony_corals_of_american_samoa_with_reference_to_mesophotic_depth_records]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=annotated_checklist_for_stony_corals_of_american_samoa_with_reference_to_mesophotic_depth_records]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=annotated_checklist_for_stony_corals_of_american_samoa_with_reference_to_mesophotic_depth_records]: scanned [745] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ant-checklist]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ant-checklist]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ant-checklist]: scanned [474] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=anthidium]: detected [7791] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=anthidium]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=anthidium]: scanned [22648] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aptostichus_locality_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aptostichus_locality_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=aptostichus_locality_data]: scanned [1499] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=arenivaga_locality_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=arenivaga_locality_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=arenivaga_locality_data]: scanned [2815] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ariadna_sa]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ariadna_sa]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ariadna_sa]: scanned [79] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=austromonticoladistribution]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=austromonticoladistribution]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=austromonticoladistribution]: scanned [83] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=bushblitz]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=bushblitz]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=bushblitz]: scanned [4] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=caperafanl]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=caperafanl]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=caperafanl]: scanned [7] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cave_dwelling_spiders_europe]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cave_dwelling_spiders_europe]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cave_dwelling_spiders_europe]: scanned [2091] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cercyon_greater_antilles]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cercyon_greater_antilles]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cercyon_greater_antilles]: scanned [194] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cfhirtipes_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cfhirtipes_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cfhirtipes_data]: scanned [147] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=checklist_of_cyanobacteria_of_greece]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=checklist_of_cyanobacteria_of_greece]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=checklist_of_cyanobacteria_of_greece]: scanned [1005] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=climber]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=climber]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=climber]: scanned [397] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_finland_lammi]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_finland_lammi]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cobra_finland_lammi]: scanned [563] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_hankoniemi_finland]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_hankoniemi_finland]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cobra_hankoniemi_finland]: scanned [741] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cordeiromoreira2015]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cordeiromoreira2015]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cordeiromoreira2015]: scanned [111] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cracidmex1]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cracidmex1]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cracidmex1]: scanned [23896] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cremastosperma_specimens]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cremastosperma_specimens]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cremastosperma_specimens]: scanned [2089] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cr_karen_aves]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cr_karen_aves]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cr_karen_aves]: scanned [208] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep-sea-fishes]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep-sea-fishes]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=deep-sea-fishes]: scanned [3653] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep_south_frullania_species]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep_south_frullania_species]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=deep_south_frullania_species]: scanned [30] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow_2010_arabian_peninsula]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow_2010_arabian_peninsula]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=dikow_2010_arabian_peninsula]: scanned [10] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2010_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2010_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=dikow2010_data]: scanned [92] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2012_namibimydas_nothomydas]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2012_namibimydas_nothomydas]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=dikow2012_namibimydas_nothomydas]: scanned [47] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternmedsyllids]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternmedsyllids]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=easternmedsyllids]: scanned [1123] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternsoyedina_project]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternsoyedina_project]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=easternsoyedina_project]: scanned [1270] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectoedemia]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectoedemia]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ectoedemia]: scanned [4886] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectyphus_parectyphus_lyons_dikow2010]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectyphus_parectyphus_lyons_dikow2010]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ectyphus_parectyphus_lyons_dikow2010]: scanned [107] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=encyclia_diota_complex]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=encyclia_diota_complex]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=encyclia_diota_complex]: scanned [46] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=frogid_dataset]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=frogid_dataset]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=frogid_dataset]: scanned [54864] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=furb_herbarium_database_11-09-2014]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=furb_herbarium_database_11-09-2014]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=furb_herbarium_database_11-09-2014]: scanned [36222] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=hauterivian_echinoids_of_the_paris_basin]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=hauterivian_echinoids_of_the_paris_basin]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=hauterivian_echinoids_of_the_paris_basin]: scanned [628] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inhs_wet_collections]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inhs_wet_collections]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=inhs_wet_collections]: scanned [5767] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inle_fish_2014-16]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inle_fish_2014-16]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=inle_fish_2014-16]: scanned [948] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=japanese_empria]: detected [8] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=japanese_empria]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=japanese_empria]: scanned [639] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=jp_loaches_3dct_models]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=jp_loaches_3dct_models]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=jp_loaches_3dct_models]: scanned [103] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kamogawa]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kamogawa]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=kamogawa]: scanned [611] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kinkajou__brazil_2018]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kinkajou__brazil_2018]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=kinkajou__brazil_2018]: scanned [2] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=komaba_ceram_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=komaba_ceram_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=komaba_ceram_data]: scanned [61] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=littoral_zone_vascular_flora_of_carolina_bay_lakes--howell_collections]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=littoral_zone_vascular_flora_of_carolina_bay_lakes--howell_collections]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=littoral_zone_vascular_flora_of_carolina_bay_lakes--howell_collections]: scanned [472] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=macrobenthos_bmapperu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=macrobenthos_bmapperu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=macrobenthos_bmapperu]: scanned [282] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mammalsdobrogea]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mammalsdobrogea]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mammalsdobrogea]: scanned [6724] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=megophthalmidia_of_north_america]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=megophthalmidia_of_north_america]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=megophthalmidia_of_north_america]: scanned [155] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mimulus_peregrinus]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mimulus_peregrinus]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mimulus_peregrinus]: scanned [1] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mississippibees]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mississippibees]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mississippibees]: scanned [158] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=montenegrina]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=montenegrina]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=montenegrina]: scanned [645] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mordellidae_new_records]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mordellidae_new_records]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mordellidae_new_records]: scanned [40] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=moreiraetal2016]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=moreiraetal2016]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=moreiraetal2016]: scanned [54] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=muse_odonata]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=muse_odonata]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=muse_odonata]: scanned [836] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=myr_dataset]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=myr_dataset]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=myr_dataset]: scanned [15] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neembucu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neembucu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=neembucu]: scanned [4133] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neobolito1]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neobolito1]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=neobolito1]: scanned [697] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=occurrence_anairetes]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=occurrence_anairetes]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=occurrence_anairetes]: scanned [2] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ohioplecopteraatlas]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ohioplecopteraatlas]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ohioplecopteraatlas]: scanned [7797] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ophiothela-mirabilis-in-the-atlantic]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ophiothela-mirabilis-in-the-atlantic]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ophiothela-mirabilis-in-the-atlantic]: scanned [24] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=opiliones2]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=opiliones2]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=opiliones2]: scanned [556] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=oriental_bolitogyrus]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=oriental_bolitogyrus]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=oriental_bolitogyrus]: scanned [200] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_b_populationandcommunitydynamics_2000-2011]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_b_populationandcommunitydynamics_2000-2011]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_b_populationandcommunitydynamics_2000-2011]: scanned [1731] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_c_populationandcommunitydynamics_2001-2011]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_c_populationandcommunitydynamics_2001-2011]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_c_populationandcommunitydynamics_2001-2011]: scanned [1970] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=perlestacinctipesproject_dcwa]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=perlestacinctipesproject_dcwa]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=perlestacinctipesproject_dcwa]: scanned [255] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=polyphaga_ateneo_manila_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=polyphaga_ateneo_manila_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=polyphaga_ateneo_manila_data]: scanned [23] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=pseudamnicola]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=pseudamnicola]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=pseudamnicola]: scanned [15] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rasvenaternaproject_dcwa_v2]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rasvenaternaproject_dcwa_v2]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=rasvenaternaproject_dcwa_v2]: scanned [41] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=reptiles_romania]: detected [16528] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=reptiles_romania]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=reptiles_romania]: scanned [16528] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rojasianthe_ocurrence_guatemala]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rojasianthe_ocurrence_guatemala]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=rojasianthe_ocurrence_guatemala]: scanned [1] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=schizanthus_specimens]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=schizanthus_specimens]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=schizanthus_specimens]: scanned [1612] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=shellfishes_in_kyushu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=shellfishes_in_kyushu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=shellfishes_in_kyushu]: scanned [5740] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=solanum_baretiae]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=solanum_baretiae]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=solanum_baretiae]: scanned [44] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=southern_ocean_asteroidea]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=southern_ocean_asteroidea]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=southern_ocean_asteroidea]: scanned [295] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=specimen_occurrence_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=specimen_occurrence_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=specimen_occurrence_data]: scanned [215] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=srli_global_araneae]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=srli_global_araneae]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=srli_global_araneae]: scanned [2378] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material1]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material1]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=supple_material1]: scanned [123] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material2]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material2]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=supple_material2]: scanned [59] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=symphytognathoid_spiders]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=symphytognathoid_spiders]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=symphytognathoid_spiders]: scanned [290] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tallaplecoproj]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tallaplecoproj]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=tallaplecoproj]: scanned [690] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tenebrionidae_north_america]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tenebrionidae_north_america]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=tenebrionidae_north_america]: scanned [5919] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=terrestrial-nematodes-of-victoria-land-antarctica]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=terrestrial-nematodes-of-victoria-land-antarctica]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=terrestrial-nematodes-of-victoria-land-antarctica]: scanned [413] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=togo_pteridophytes]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=togo_pteridophytes]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=togo_pteridophytes]: scanned [863] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=trogon_brueelia_2011]: detected [42] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=trogon_brueelia_2011]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=trogon_brueelia_2011]: scanned [42] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=two_new_species_in_the_matelea_stenopetala_complex_from_the_guiana_shield_and_amazonian_brazil]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=two_new_species_in_the_matelea_stenopetala_complex_from_the_guiana_shield_and_amazonian_brazil]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=two_new_species_in_the_matelea_stenopetala_complex_from_the_guiana_shield_and_amazonian_brazil]: scanned [18] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=type_specimen_data_for_new_species_nicrophorus_efferens]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=type_specimen_data_for_new_species_nicrophorus_efferens]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=type_specimen_data_for_new_species_nicrophorus_efferens]: scanned [6] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=unionidae3d]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=unionidae3d]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=unionidae3d]: scanned [61] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=waspsperu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=waspsperu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=waspsperu]: scanned [2910] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=zhangchen1994]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=zhangchen1994]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=zhangchen1994]: scanned [3] record(s) 1 info [http://ipt.vertnet.org:8080/ipt/archive.do?r=dbg_chatfieldfarms_riparianrestoration]: detected [0] interaction record(s) 1 info [http://ipt.vertnet.org:8080/ipt/archive.do?r=dbg_chatfieldfarms_riparianrestoration]: indexing interaction records 1 info [http://ipt.vertnet.org:8080/ipt/archive.do?r=dbg_chatfieldfarms_riparianrestoration]: scanned [335] record(s) 1 info [https://plutof.ut.ee/ipt/archive.do?r=naturesound]: indexing interaction records 1 issue [] Caused by: org.eol.globi.data.StudyImporterException: failed to access DwC archive at [https://plutof.ut.ee/ipt/archive.do?r=naturesound] at org.eol.globi.data.StudyImporterForDwCA.importStudy(StudyImporterForDwCA.java:110) at org.eol.globi.data.StudyImporterForRSS.handleDataset(StudyImporterForRSS.java:116) at org.eol.globi.data.StudyImporterForRSS.importArchives(StudyImporterForRSS.java:60) at org.eol.globi.data.StudyImporterForRSS.importStudy(StudyImporterForRSS.java:52) at org.eol.globi.data.StudyImporterForRegistry.importData(StudyImporterForRegistry.java:77) at org.globalbioticinteractions.elton.cmd.CmdReview.review(CmdReview.java:146) at org.globalbioticinteractions.elton.cmd.CmdReview.reviewCachedOrRemote(CmdReview.java:111) at org.globalbioticinteractions.elton.cmd.CmdReview.run(CmdReview.java:102) at org.globalbioticinteractions.elton.cmd.CmdLine.run(CmdLine.java:18) at org.globalbioticinteractions.elton.cmd.CmdLine.run(CmdLine.java:27) at org.globalbioticinteractions.elton.Elton.main(Elton.java:20) 1 issue found invalid location: [invalid (latitude, longitude) = (58.40917N,26.56444E)] 20 issue date [0012-01-01T00:00:00Z] occurred in the first century AD 20 issue invalid date string [2005-10~2006-02] 22 issue date [0003-01-01T00:00:00Z] occurred in the first century AD 26 issue invalid date string [2004-04~2005-07] 2 info [http://ipt.pensoft.net/archive.do?r=usbombus]: detected [5173] interaction record(s) 2 info [http://ipt.pensoft.net/archive.do?r=usbombus]: indexing interaction records 2 info [http://ipt.pensoft.net/archive.do?r=usbombus]: scanned [10211] record(s) 2 issue invalid date string [2003-06~2004-08] 2 issue invalid date string [2006~2007] 326 issue invalid date string [1984~2000] 38 issue invalid date string [2013~2014] 42 issue found invalid location: [invalid (latitude, longitude) = (#N/A,#N/A)] 44 issue invalid date string [2016~2017] 4 issue invalid date string [2015-05~2016-07] 594 issue source taxon name missing 7725 issue target taxon name missing 85492 info biotic interaction found + echo -e '\n---- indexed interaction record count by institutionCode, collectionId, collectionCode, and interaction type ----' ---- indexed interaction record count by institutionCode, collectionId, collectionCode, and interaction type ---- + cat /home/jhpoelen/tpt-reporting/output/2020-05-22/indexed_interactions_by_collection.tsv institutionCode collectionId collectionCode sourceCitation indexedInteractionRecordCount interactionTypeName interactionTypeId A taxonomic synopsis of Altingiaceae with nine new combinations - Version 2.1 4 interactsWith http://purl.obolibrary.org/obo/RO_0002437 Chen L, Liu B, Yang J, Jin Q, 2014. DBatVir: the database of bat-associated viruses. Database (Oxford). 2014:bau021. doi:10.1093/database/bau021 11414 hostOf http://purl.obolibrary.org/obo/RO_0002453 De Rojas M, Doña J, Dimov I (2020) A comprehensive survey of Rhinonyssid mites (Mesostigmata: Rhinonyssidae) in Northwest Russia: New mite-host associations and prevalence data. Biodiversity Data Journal 8: e49535. https://doi.org/10.3897/BDJ.8.e49535 86 hostOf http://purl.obolibrary.org/obo/RO_0002453 Diversity and distribution of reptiles in Romania - Version 1.1 16528 interactsWith http://purl.obolibrary.org/obo/RO_0002437 Eneida L. Hatcher, Sergey A. Zhdanov, Yiming Bao, Olga Blinkova, Eric P. Nawrocki, Yuri Ostapchuck, Alejandro A. Schäffer, J. Rodney Brister, Virus Variation Resource – improved response to emergent viral outbreaks, Nucleic Acids Research, Volume 45, Issue D1, January 2017, Pages D482–D490, https://doi.org/10.1093/nar/gkw1065 . Data downloaded via https://www.ncbi.nlm.nih.gov/labs/virus/vssi on 2020-03-14 25718 hasHost http://purl.obolibrary.org/obo/RO_0002454 FMNH Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0 11 hasHost http://purl.obolibrary.org/obo/RO_0002454 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 112 pollinates http://purl.obolibrary.org/obo/RO_0002455 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 1737 eats http://purl.obolibrary.org/obo/RO_0002470 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 1 preyedUponBy http://purl.obolibrary.org/obo/RO_0002458 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 2280 visits http://purl.obolibrary.org/obo/RO_0002618 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 23 hostOf http://purl.obolibrary.org/obo/RO_0002453 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 2414 preysOn http://purl.obolibrary.org/obo/RO_0002439 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 3586 vectorOf http://purl.obolibrary.org/obo/RO_0002459 Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org 36 coOccursWith http://purl.obolibrary.org/obo/RO_0008506 Marcus Guidoti, Tatiana Ruschel, Donat Agosti. 2020. Corona virus related biotic associations manually extracted from literature. Plazi. 325 hostOf http://purl.obolibrary.org/obo/RO_0002453 MZUSP Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0 13 hasHost http://purl.obolibrary.org/obo/RO_0002454 Olival, K. J., Hosseini, P. R., Zambrana-Torrelio, C., Ross, N., Bogich, T. L., & Daszak, P. (2017). Host and viral traits predict zoonotic spillover from mammals. Nature, 546(7660), 646–650. doi:10.1038/nature22975 2805 pathogenOf http://purl.obolibrary.org/obo/RO_0002556 PIPeR Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0 18 hasHost http://purl.obolibrary.org/obo/RO_0002454 Quentin J. Groom. 2020. Bat interation data manually extracted from literature. 10 coOccursWith http://purl.obolibrary.org/obo/RO_0008506 Quentin J. Groom. 2020. Bat interation data manually extracted from literature. 1 visitsFlowersOf http://purl.obolibrary.org/obo/RO_0002622 Quentin J. Groom. 2020. Bat interation data manually extracted from literature. 2 createsHabitatFor http://purl.obolibrary.org/obo/RO_0008505 Quentin J. Groom. 2020. Bat interation data manually extracted from literature. 38 kills http://purl.obolibrary.org/obo/RO_0002626 Quentin J. Groom. 2020. Bat interation data manually extracted from literature. 86 ectoparasiteOf http://purl.obolibrary.org/obo/RO_0002632 Quentin J. Groom. 2020. Bat interation data manually extracted from literature. 8 preysOn http://purl.obolibrary.org/obo/RO_0002439 Quentin J. Groom. 2020. Bat interation data manually extracted from literature. 90 eats http://purl.obolibrary.org/obo/RO_0002470 TUZ MP Empria and Monsoma in Japan - Version 6.0 8 hasHost http://purl.obolibrary.org/obo/RO_0002454 United States Department of Agriculture, Agriculture Research Service, Bee Biology and Systematics Laboratory, Logan, Utah Content licensed under Creative Commons Attribution-NonCommercial-ShareAlike 3.0 United States (CC BY-NC-SA 3.0).http://creativecommons.org/licenses/by-nc-sa/3.0/us/ . User must cite: U. S. National Pollinating Insects Database, United States Department of Agriculture, Agriculture Research Service, Bee Biology and Systematics Laboratory, Logan, Utah (Accessed YYYY-DD-MM) urn:catalog:USDA-ARS:BBSL:98250 AnthWest, occurrence records for wool carder bees of the genus Anthidium (Hymenoptera: Megachilidae, Anthidiini) in the Western Hemisphere - Version 7.0 1 interactsWith http://purl.obolibrary.org/obo/RO_0002437 USDA-ARS urn:lsid:biocol.org:col:33039 BBSL AnthWest, occurrence records for wool carder bees of the genus Anthidium (Hymenoptera: Megachilidae, Anthidiini) in the Western Hemisphere - Version 7.0 7790 interactsWith http://purl.obolibrary.org/obo/RO_0002437 USDA-ARS urn:lsid:biocol.org:col:33039 BBSL New species of the Eastern Hemisphere genera Afroheriades and Noteriades (Hymenoptera, Megachilidae) - Version 1.0 1 interactsWith http://purl.obolibrary.org/obo/RO_0002437 USDA-ARS urn:lsid:biocol.org:col:33039 BBSL USBombus, contemporary survey data of North American bumble bees (Hymenoptera, Apidae, Bombus) distributed in the United States 5173 interactsWith http://purl.obolibrary.org/obo/RO_0002437 USDA-ARS urn:lsid:biocol.org:col:33039 BBSL USBombus, contemporary survey data of North American bumble bees (Hymenoptera, Apidae, Bombus) distributed in the United States - Version 2.9 5173 interactsWith http://purl.obolibrary.org/obo/RO_0002437 + echo -e '\n---- distinct review comment count by institution, collection and review comment type ----' ---- distinct review comment count by institution, collection and review comment type ---- + cat /home/jhpoelen/tpt-reporting/output/2020-05-22/review_summary_by_collection.tsv institutionCode collectionId collectionCode sourceCitation distinctReviewCommentCount type comment 1146 issue found [23] columns, but only [14] columns are defined: ignoring remaining undefined columns. 18 issue invalid date string [2013~2015] 1 info [http://130.120.204.55:8080/ipt/archive.do?r=harvestmen_of_french_guiana]: detected [0] interaction record(s) 1 info [http://130.120.204.55:8080/ipt/archive.do?r=harvestmen_of_french_guiana]: indexing interaction records 1 info [http://130.120.204.55:8080/ipt/archive.do?r=harvestmen_of_french_guiana]: scanned [3405] record(s) 1 info [http://ipt.gbif.pt/ipt/archive.do?r=global_database_of_alien_macrofungi]: detected [0] interaction record(s) 1 info [http://ipt.gbif.pt/ipt/archive.do?r=global_database_of_alien_macrofungi]: indexing interaction records 1 info [http://ipt.gbif.pt/ipt/archive.do?r=global_database_of_alien_macrofungi]: scanned [679] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aafc-brassicaceae-checklist]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aafc-brassicaceae-checklist]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=aafc-brassicaceae-checklist]: scanned [14981] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=accipiter_ne_br]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=accipiter_ne_br]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=accipiter_ne_br]: scanned [6] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=acuclavellalocalities_richarthedin]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=acuclavellalocalities_richarthedin]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=acuclavellalocalities_richarthedin]: scanned [284] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=afroheriades]: detected [1] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=afroheriades]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=afroheriades]: scanned [75] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=alloperlaproject]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=alloperlaproject]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=alloperlaproject]: scanned [107] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=altingiaceae_synopsis]: detected [4] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=altingiaceae_synopsis]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=altingiaceae_synopsis]: scanned [928] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amauropelma_matakecil]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amauropelma_matakecil]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=amauropelma_matakecil]: scanned [5] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amphibian_romania]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=amphibian_romania]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=amphibian_romania]: scanned [25675] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ancyronyx_mindoro_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ancyronyx_mindoro_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ancyronyx_mindoro_data]: scanned [539] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=annotated_checklist_for_stony_corals_of_american_samoa_with_reference_to_mesophotic_depth_records]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=annotated_checklist_for_stony_corals_of_american_samoa_with_reference_to_mesophotic_depth_records]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=annotated_checklist_for_stony_corals_of_american_samoa_with_reference_to_mesophotic_depth_records]: scanned [745] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ant-checklist]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ant-checklist]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ant-checklist]: scanned [474] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=anthidium]: detected [7791] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=anthidium]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=anthidium]: scanned [22648] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aptostichus_locality_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=aptostichus_locality_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=aptostichus_locality_data]: scanned [1499] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=arenivaga_locality_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=arenivaga_locality_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=arenivaga_locality_data]: scanned [2815] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ariadna_sa]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ariadna_sa]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ariadna_sa]: scanned [79] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=austromonticoladistribution]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=austromonticoladistribution]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=austromonticoladistribution]: scanned [83] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=bushblitz]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=bushblitz]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=bushblitz]: scanned [4] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=caperafanl]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=caperafanl]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=caperafanl]: scanned [7] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cave_dwelling_spiders_europe]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cave_dwelling_spiders_europe]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cave_dwelling_spiders_europe]: scanned [2091] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cercyon_greater_antilles]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cercyon_greater_antilles]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cercyon_greater_antilles]: scanned [194] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cfhirtipes_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cfhirtipes_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cfhirtipes_data]: scanned [147] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=checklist_of_cyanobacteria_of_greece]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=checklist_of_cyanobacteria_of_greece]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=checklist_of_cyanobacteria_of_greece]: scanned [1005] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=climber]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=climber]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=climber]: scanned [397] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_finland_lammi]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_finland_lammi]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cobra_finland_lammi]: scanned [563] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_hankoniemi_finland]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cobra_hankoniemi_finland]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cobra_hankoniemi_finland]: scanned [741] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cordeiromoreira2015]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cordeiromoreira2015]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cordeiromoreira2015]: scanned [111] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cracidmex1]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cracidmex1]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cracidmex1]: scanned [23896] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cremastosperma_specimens]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cremastosperma_specimens]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cremastosperma_specimens]: scanned [2089] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cr_karen_aves]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=cr_karen_aves]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=cr_karen_aves]: scanned [208] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep-sea-fishes]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep-sea-fishes]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=deep-sea-fishes]: scanned [3653] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep_south_frullania_species]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=deep_south_frullania_species]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=deep_south_frullania_species]: scanned [30] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow_2010_arabian_peninsula]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow_2010_arabian_peninsula]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=dikow_2010_arabian_peninsula]: scanned [10] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2010_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2010_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=dikow2010_data]: scanned [92] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2012_namibimydas_nothomydas]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=dikow2012_namibimydas_nothomydas]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=dikow2012_namibimydas_nothomydas]: scanned [47] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternmedsyllids]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternmedsyllids]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=easternmedsyllids]: scanned [1123] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternsoyedina_project]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=easternsoyedina_project]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=easternsoyedina_project]: scanned [1270] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectoedemia]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectoedemia]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ectoedemia]: scanned [4886] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectyphus_parectyphus_lyons_dikow2010]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ectyphus_parectyphus_lyons_dikow2010]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ectyphus_parectyphus_lyons_dikow2010]: scanned [107] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=encyclia_diota_complex]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=encyclia_diota_complex]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=encyclia_diota_complex]: scanned [46] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=frogid_dataset]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=frogid_dataset]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=frogid_dataset]: scanned [54864] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=furb_herbarium_database_11-09-2014]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=furb_herbarium_database_11-09-2014]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=furb_herbarium_database_11-09-2014]: scanned [36222] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=hauterivian_echinoids_of_the_paris_basin]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=hauterivian_echinoids_of_the_paris_basin]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=hauterivian_echinoids_of_the_paris_basin]: scanned [628] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inhs_wet_collections]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inhs_wet_collections]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=inhs_wet_collections]: scanned [5767] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inle_fish_2014-16]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=inle_fish_2014-16]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=inle_fish_2014-16]: scanned [948] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=japanese_empria]: detected [8] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=japanese_empria]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=japanese_empria]: scanned [639] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=jp_loaches_3dct_models]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=jp_loaches_3dct_models]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=jp_loaches_3dct_models]: scanned [103] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kamogawa]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kamogawa]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=kamogawa]: scanned [611] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kinkajou__brazil_2018]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=kinkajou__brazil_2018]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=kinkajou__brazil_2018]: scanned [2] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=komaba_ceram_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=komaba_ceram_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=komaba_ceram_data]: scanned [61] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=littoral_zone_vascular_flora_of_carolina_bay_lakes--howell_collections]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=littoral_zone_vascular_flora_of_carolina_bay_lakes--howell_collections]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=littoral_zone_vascular_flora_of_carolina_bay_lakes--howell_collections]: scanned [472] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=macrobenthos_bmapperu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=macrobenthos_bmapperu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=macrobenthos_bmapperu]: scanned [282] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mammalsdobrogea]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mammalsdobrogea]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mammalsdobrogea]: scanned [6724] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=megophthalmidia_of_north_america]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=megophthalmidia_of_north_america]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=megophthalmidia_of_north_america]: scanned [155] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mimulus_peregrinus]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mimulus_peregrinus]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mimulus_peregrinus]: scanned [1] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mississippibees]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mississippibees]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mississippibees]: scanned [158] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=montenegrina]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=montenegrina]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=montenegrina]: scanned [645] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mordellidae_new_records]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=mordellidae_new_records]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=mordellidae_new_records]: scanned [40] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=moreiraetal2016]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=moreiraetal2016]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=moreiraetal2016]: scanned [54] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=muse_odonata]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=muse_odonata]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=muse_odonata]: scanned [836] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=myr_dataset]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=myr_dataset]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=myr_dataset]: scanned [15] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neembucu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neembucu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=neembucu]: scanned [4133] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neobolito1]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=neobolito1]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=neobolito1]: scanned [697] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=occurrence_anairetes]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=occurrence_anairetes]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=occurrence_anairetes]: scanned [2] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ohioplecopteraatlas]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ohioplecopteraatlas]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ohioplecopteraatlas]: scanned [7797] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ophiothela-mirabilis-in-the-atlantic]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=ophiothela-mirabilis-in-the-atlantic]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=ophiothela-mirabilis-in-the-atlantic]: scanned [24] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=opiliones2]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=opiliones2]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=opiliones2]: scanned [556] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=oriental_bolitogyrus]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=oriental_bolitogyrus]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=oriental_bolitogyrus]: scanned [200] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_b_populationandcommunitydynamics_2000-2011]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_b_populationandcommunitydynamics_2000-2011]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_b_populationandcommunitydynamics_2000-2011]: scanned [1731] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_c_populationandcommunitydynamics_2001-2011]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_c_populationandcommunitydynamics_2001-2011]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=peqrb_c_populationandcommunitydynamics_2001-2011]: scanned [1970] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=perlestacinctipesproject_dcwa]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=perlestacinctipesproject_dcwa]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=perlestacinctipesproject_dcwa]: scanned [255] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=polyphaga_ateneo_manila_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=polyphaga_ateneo_manila_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=polyphaga_ateneo_manila_data]: scanned [23] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=pseudamnicola]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=pseudamnicola]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=pseudamnicola]: scanned [15] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rasvenaternaproject_dcwa_v2]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rasvenaternaproject_dcwa_v2]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=rasvenaternaproject_dcwa_v2]: scanned [41] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=reptiles_romania]: detected [16528] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=reptiles_romania]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=reptiles_romania]: scanned [16528] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rojasianthe_ocurrence_guatemala]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=rojasianthe_ocurrence_guatemala]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=rojasianthe_ocurrence_guatemala]: scanned [1] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=schizanthus_specimens]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=schizanthus_specimens]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=schizanthus_specimens]: scanned [1612] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=shellfishes_in_kyushu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=shellfishes_in_kyushu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=shellfishes_in_kyushu]: scanned [5740] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=solanum_baretiae]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=solanum_baretiae]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=solanum_baretiae]: scanned [44] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=southern_ocean_asteroidea]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=southern_ocean_asteroidea]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=southern_ocean_asteroidea]: scanned [295] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=specimen_occurrence_data]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=specimen_occurrence_data]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=specimen_occurrence_data]: scanned [215] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=srli_global_araneae]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=srli_global_araneae]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=srli_global_araneae]: scanned [2378] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material1]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material1]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=supple_material1]: scanned [123] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material2]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=supple_material2]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=supple_material2]: scanned [59] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=symphytognathoid_spiders]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=symphytognathoid_spiders]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=symphytognathoid_spiders]: scanned [290] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tallaplecoproj]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tallaplecoproj]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=tallaplecoproj]: scanned [690] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tenebrionidae_north_america]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=tenebrionidae_north_america]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=tenebrionidae_north_america]: scanned [5919] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=terrestrial-nematodes-of-victoria-land-antarctica]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=terrestrial-nematodes-of-victoria-land-antarctica]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=terrestrial-nematodes-of-victoria-land-antarctica]: scanned [413] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=togo_pteridophytes]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=togo_pteridophytes]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=togo_pteridophytes]: scanned [863] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=trogon_brueelia_2011]: detected [42] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=trogon_brueelia_2011]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=trogon_brueelia_2011]: scanned [42] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=two_new_species_in_the_matelea_stenopetala_complex_from_the_guiana_shield_and_amazonian_brazil]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=two_new_species_in_the_matelea_stenopetala_complex_from_the_guiana_shield_and_amazonian_brazil]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=two_new_species_in_the_matelea_stenopetala_complex_from_the_guiana_shield_and_amazonian_brazil]: scanned [18] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=type_specimen_data_for_new_species_nicrophorus_efferens]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=type_specimen_data_for_new_species_nicrophorus_efferens]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=type_specimen_data_for_new_species_nicrophorus_efferens]: scanned [6] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=unionidae3d]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=unionidae3d]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=unionidae3d]: scanned [61] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=waspsperu]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=waspsperu]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=waspsperu]: scanned [2910] record(s) 1 info [http://ipt.pensoft.net/archive.do?r=zhangchen1994]: detected [0] interaction record(s) 1 info [http://ipt.pensoft.net/archive.do?r=zhangchen1994]: indexing interaction records 1 info [http://ipt.pensoft.net/archive.do?r=zhangchen1994]: scanned [3] record(s) 1 info [http://ipt.vertnet.org:8080/ipt/archive.do?r=dbg_chatfieldfarms_riparianrestoration]: detected [0] interaction record(s) 1 info [http://ipt.vertnet.org:8080/ipt/archive.do?r=dbg_chatfieldfarms_riparianrestoration]: indexing interaction records 1 info [http://ipt.vertnet.org:8080/ipt/archive.do?r=dbg_chatfieldfarms_riparianrestoration]: scanned [335] record(s) 1 info [https://plutof.ut.ee/ipt/archive.do?r=naturesound]: indexing interaction records 1 issue [] Caused by: org.eol.globi.data.StudyImporterException: failed to access DwC archive at [https://plutof.ut.ee/ipt/archive.do?r=naturesound] at org.eol.globi.data.StudyImporterForDwCA.importStudy(StudyImporterForDwCA.java:110) at org.eol.globi.data.StudyImporterForRSS.handleDataset(StudyImporterForRSS.java:116) at org.eol.globi.data.StudyImporterForRSS.importArchives(StudyImporterForRSS.java:60) at org.eol.globi.data.StudyImporterForRSS.importStudy(StudyImporterForRSS.java:52) at org.eol.globi.data.StudyImporterForRegistry.importData(StudyImporterForRegistry.java:77) at org.globalbioticinteractions.elton.cmd.CmdReview.review(CmdReview.java:146) at org.globalbioticinteractions.elton.cmd.CmdReview.reviewCachedOrRemote(CmdReview.java:111) at org.globalbioticinteractions.elton.cmd.CmdReview.run(CmdReview.java:102) at org.globalbioticinteractions.elton.cmd.CmdLine.run(CmdLine.java:18) at org.globalbioticinteractions.elton.cmd.CmdLine.run(CmdLine.java:27) at org.globalbioticinteractions.elton.Elton.main(Elton.java:20) 20 issue invalid date string [2005-10~2006-02] 21603 info biotic interaction found 26 issue invalid date string [2004-04~2005-07] 2 info [http://ipt.pensoft.net/archive.do?r=usbombus]: detected [5173] interaction record(s) 2 info [http://ipt.pensoft.net/archive.do?r=usbombus]: indexing interaction records 2 info [http://ipt.pensoft.net/archive.do?r=usbombus]: scanned [10211] record(s) 2 issue invalid date string [2003-06~2004-08] 2 issue invalid date string [2006~2007] 326 issue invalid date string [1984~2000] 38 issue invalid date string [2013~2014] 44 issue invalid date string [2016~2017] 4 issue invalid date string [2015-05~2016-07] A taxonomic synopsis of Altingiaceae with nine new combinations - Version 2.1. Accessed at on 22 May 2020. 4 info biotic interaction found De Rojas M, Doña J, Dimov I (2020) A comprehensive survey of Rhinonyssid mites (Mesostigmata: Rhinonyssidae) in Northwest Russia: New mite-host associations and prevalence data. Biodiversity Data Journal 8: e49535. https://doi.org/10.3897/BDJ.8.e49535. Accessed at on 22 May 2020. 51 issue target taxon name missing De Rojas M, Doña J, Dimov I (2020) A comprehensive survey of Rhinonyssid mites (Mesostigmata: Rhinonyssidae) in Northwest Russia: New mite-host associations and prevalence data. Biodiversity Data Journal 8: e49535. https://doi.org/10.3897/BDJ.8.e49535. Accessed at on 22 May 2020. 86 info biotic interaction found Diversity and distribution of reptiles in Romania - Version 1.1. Accessed at on 22 May 2020. 16528 info biotic interaction found Diversity and distribution of reptiles in Romania - Version 1.1. Accessed at on 22 May 2020. 42 issue found invalid location: [invalid (latitude, longitude) = (#N/A,#N/A)] Eneida L. Hatcher, Sergey A. Zhdanov, Yiming Bao, Olga Blinkova, Eric P. Nawrocki, Yuri Ostapchuck, Alejandro A. Schäffer, J. Rodney Brister, Virus Variation Resource – improved response to emergent viral outbreaks, Nucleic Acids Research, Volume 45, Issue D1, January 2017, Pages D482–D490, https://doi.org/10.1093/nar/gkw1065 . Data downloaded via https://www.ncbi.nlm.nih.gov/labs/virus/vssi on 2020-03-14. Accessed at on 22 May 2020. 25718 info biotic interaction found Eneida L. Hatcher, Sergey A. Zhdanov, Yiming Bao, Olga Blinkova, Eric P. Nawrocki, Yuri Ostapchuck, Alejandro A. Schäffer, J. Rodney Brister, Virus Variation Resource – improved response to emergent viral outbreaks, Nucleic Acids Research, Volume 45, Issue D1, January 2017, Pages D482–D490, https://doi.org/10.1093/nar/gkw1065 . Data downloaded via https://www.ncbi.nlm.nih.gov/labs/virus/vssi on 2020-03-14. Accessed at on 22 May 2020. 7447 issue target taxon name missing FMNH Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 10 issue date [0008-01-01T00:00:00Z] occurred in the first century AD FMNH Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 11 info biotic interaction found FMNH Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 6 issue date [0007-01-01T00:00:00Z] occurred in the first century AD FMNH Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 6 issue date [0012-01-01T00:00:00Z] occurred in the first century AD Marcus Guidoti, Tatiana Ruschel, Donat Agosti. 2020. Corona virus related biotic associations manually extracted from literature. Plazi. Accessed at on 22 May 2020. 227 issue target taxon name missing Marcus Guidoti, Tatiana Ruschel, Donat Agosti. 2020. Corona virus related biotic associations manually extracted from literature. Plazi. Accessed at on 22 May 2020. 325 info biotic interaction found Marcus Guidoti, Tatiana Ruschel, Donat Agosti. 2020. Corona virus related biotic associations manually extracted from literature. Plazi. Accessed at on 22 May 2020. 594 issue source taxon name missing MZUSP Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 12 issue date [0007-01-01T00:00:00Z] occurred in the first century AD MZUSP Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 13 info biotic interaction found MZUSP Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 14 issue date [0012-01-01T00:00:00Z] occurred in the first century AD Olival, K. J., Hosseini, P. R., Zambrana-Torrelio, C., Ross, N., Bogich, T. L., & Daszak, P. (2017). Host and viral traits predict zoonotic spillover from mammals. Nature, 546(7660), 646–650. doi:10.1038/nature22975. Accessed at on 22 May 2020. 2805 info biotic interaction found PIPeR Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 14 issue date [0009-01-01T00:00:00Z] occurred in the first century AD PIPeR Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 18 info biotic interaction found PIPeR Insects/Biodiversity Two new species of Brueelia Kéler, 1936 (Ischnocera, Philopteridae) parasitic on Neotropical trogons (Aves, Trogoniformes) - Version 11.0. Accessed at on 22 May 2020. 22 issue date [0003-01-01T00:00:00Z] occurred in the first century AD Quentin J. Groom. 2020. Bat interation data manually extracted from literature.. Accessed at on 22 May 2020. 235 info biotic interaction found TUZ MP Empria and Monsoma in Japan - Version 6.0. Accessed at on 22 May 2020. 1 issue found invalid location: [invalid (latitude, longitude) = (58.40917N,26.56444E)] TUZ MP Empria and Monsoma in Japan - Version 6.0. Accessed at on 22 May 2020. 8 info biotic interaction found United States Department of Agriculture, Agriculture Research Service, Bee Biology and Systematics Laboratory, Logan, Utah Content licensed under Creative Commons Attribution-NonCommercial-ShareAlike 3.0 United States (CC BY-NC-SA 3.0).http://creativecommons.org/licenses/by-nc-sa/3.0/us/ . User must cite: U. S. National Pollinating Insects Database, United States Department of Agriculture, Agriculture Research Service, Bee Biology and Systematics Laboratory, Logan, Utah (Accessed YYYY-DD-MM) urn:catalog:USDA-ARS:BBSL:98250 AnthWest, occurrence records for wool carder bees of the genus Anthidium (Hymenoptera: Megachilidae, Anthidiini) in the Western Hemisphere - Version 7.0. Accessed at on 22 May 2020. 1 info biotic interaction found USDA-ARS urn:lsid:biocol.org:col:33039 BBSL AnthWest, occurrence records for wool carder bees of the genus Anthidium (Hymenoptera: Megachilidae, Anthidiini) in the Western Hemisphere - Version 7.0. Accessed at on 22 May 2020. 7790 info biotic interaction found USDA-ARS urn:lsid:biocol.org:col:33039 BBSL New species of the Eastern Hemisphere genera Afroheriades and Noteriades (Hymenoptera, Megachilidae) - Version 1.0. Accessed at on 22 May 2020. 1 info biotic interaction found USDA-ARS urn:lsid:biocol.org:col:33039 BBSL USBombus, contemporary survey data of North American bumble bees (Hymenoptera, Apidae, Bombus) distributed in the United States. Accessed at on 22 May 2020. 5173 info biotic interaction found USDA-ARS urn:lsid:biocol.org:col:33039 BBSL USBombus, contemporary survey data of North American bumble bees (Hymenoptera, Apidae, Bombus) distributed in the United States - Version 2.9. Accessed at on 22 May 2020. 5173 info biotic interaction found + echo 'globalbioticinteractions/plazi-covid19 globalbioticinteractions/pensoft-table globalbioticinteractions/pensoft-dwca globalbioticinteractions/pensoft-ipt globalbioticinteractions/olival2017 globalbioticinteractions/dbatvir globalbioticinteractions/batplant globalbioticinteractions/ncbi-virus qgroom/batinterations' + xargs elton datasets -\|/-\|-\++ cat /home/jhpoelen/tpt-reporting/output/2020-05-22/datasets_under_review.tsv ++ cut -f2,3,4 ++ tail -n +2 ++ sed -E 's/\t/ accessed via /' ++ sed -E 's/^/ - /g' ++ sed -E 's/\t/ on /' + DATASET_REFERENCES=' - Marcus Guidoti, Tatiana Ruschel, Donat Agosti. 2020. Corona virus related biotic associations manually extracted from literature. Plazi. accessed via https://github.com/globalbioticinteractions/plazi-covid19/archive/326578b0d9f974760dcd2e962d86636a6487a6c0.zip on 2020-05-22T02:01:47.012Z - De Rojas M, Doña J, Dimov I (2020) A comprehensive survey of Rhinonyssid mites (Mesostigmata: Rhinonyssidae) in Northwest Russia: New mite-host associations and prevalence data. Biodiversity Data Journal 8: e49535. https://doi.org/10.3897/BDJ.8.e49535 accessed via https://github.com/globalbioticinteractions/pensoft-table/archive/3488e0397ca4e083d5eca6949951e426a75713e3.zip on 2020-05-22T02:01:52.283Z - Pensoft Darwin Core Archives with associateTaxa columns accessed via https://github.com/globalbioticinteractions/pensoft-dwca/archive/a3e075e4d7a03ba3605af144e3f2a4e55e4bdb03.zip on 2020-05-22T02:02:01.136Z - Pensoft Darwin Core Archives available via Integrated Publication Toolkit accessed via https://github.com/globalbioticinteractions/pensoft-ipt/archive/4ad4b47978324681289e36f8c2b247b1bcc97b1a.zip on 2020-05-22T02:02:26.744Z - Olival, K. J., Hosseini, P. R., Zambrana-Torrelio, C., Ross, N., Bogich, T. L., & Daszak, P. (2017). Host and viral traits predict zoonotic spillover from mammals. Nature, 546(7660), 646–650. doi:10.1038/nature22975 accessed via https://github.com/globalbioticinteractions/olival2017/archive/f61070a5339d0e6c6e76d7eb4e2102decb52317d.zip on 2020-05-22T02:02:29.429Z - Chen L, Liu B, Yang J, Jin Q, 2014. DBatVir: the database of bat-associated viruses. Database (Oxford). 2014:bau021. doi:10.1093/database/bau021 accessed via https://github.com/globalbioticinteractions/dbatvir/archive/bcfe5b7ada567771aedf291474c896dc94550681.zip on 2020-05-22T02:02:33.242Z - Geiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org accessed via https://github.com/globalbioticinteractions/batplant/archive/1fe61d1e90335cf3716365d1322c79abde5a4ca7.zip on 2020-05-22T02:11:57.105Z - Eneida L. Hatcher, Sergey A. Zhdanov, Yiming Bao, Olga Blinkova, Eric P. Nawrocki, Yuri Ostapchuck, Alejandro A. Schäffer, J. Rodney Brister, Virus Variation Resource – improved response to emergent viral outbreaks, Nucleic Acids Research, Volume 45, Issue D1, January 2017, Pages D482–D490, https://doi.org/10.1093/nar/gkw1065 . Data downloaded via https://www.ncbi.nlm.nih.gov/labs/virus/vssi on 2020-03-14 accessed via https://github.com/globalbioticinteractions/ncbi-virus/archive/60769efcda06b4719e358e3bae7bad93ccebabe6.zip on 2020-05-22T02:13:45.985Z - Quentin J. Groom. 2020. Bat interation data manually extracted from literature. accessed via https://zenodo.org/record/3816676/files/qgroom/batinterations-v1.0.1.zip on 2020-05-22T02:13:51.699Z' + generateReadme + cat ++ which elton + cp /usr/local/bin/elton /home/jhpoelen/tpt-reporting/output/2020-05-22/elton.jar ++ cat /home/jhpoelen/tpt-reporting/output/2020-05-22/indexed_interactions_full.tsv.gz ++ gunzip ++ sort ++ uniq ++ wc -l + NUMBER_OF_INTERACTIONS=79265 + '[' 79265 -gt 1 ']' + '[' -z ']' + echo 'Done generating report. See [/home/jhpoelen/tpt-reporting/output/2020-05-22] for results.' Done generating report. See [/home/jhpoelen/tpt-reporting/output/2020-05-22] for results.