Dataset Open Access

Image tiles of TCGA-CRC-DX histological whole slide images, non-normalized, tumor only

Kather, Jakob Nikolas


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{
  "description": "<p>These are image tiles of tumor tissue of N=604 colorectal cancer (CRC) histological whole slide images in the TCGA database. The tumor tissue was manually outlined and cut into non-overlapping tiles of 512x512 px at 0.5 &micro;m/px. No further preprocessing was applied. No color normalization was applied. Tiles are compressed with JPEG. Each ZIP file corresponds to one whole slide image (original format: SVS).</p>\n\n<p>Please cite our previous publication related to this dataset: https://www.nature.com/articles/s41591-019-0462-y</p>\n\n<p>Please observe the original TCGA licenses if you use the data https://portal.gdc.cancer.gov/</p>\n\n<p>Original image credit to TCGA: https://portal.gdc.cancer.gov/</p>\n\n<p>Image tiles were created with QuPath v0.1.2 https://qupath.github.io</p>\n\n<p>Genetic data matching these images are available at https://cbioportal.org</p>\n\n<p>More information on the procedures: https://zenodo.org/record/3694994</p>", 
  "license": "https://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "affiliation": "RWTH Aachen University", 
      "@id": "https://orcid.org/0000-0002-3730-5348", 
      "@type": "Person", 
      "name": "Kather, Jakob Nikolas"
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  "url": "https://zenodo.org/record/3784345", 
  "datePublished": "2020-05-04", 
  "version": "v0.1", 
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