10.5281/zenodo.3764834
https://zenodo.org/records/3764834
oai:zenodo.org:3764834
European Food Safety Authority
European Food Safety Authority
Update of the Xylella spp. host plant database
Zenodo
2020
data extraction
data collection
literature review
host plants database
Multilocus sequence type
Xylella spp.
Xylella fastidiosa
Xylella taiwanensis
Czwienczek, Ewelina
Ewelina
Czwienczek
European Food Safety Authority
Delbianco, Alice
Alice
Delbianco
European Food Safety Authority
Kaluski, Tomasz
Tomasz
Kaluski
European Food Safety Authority
Kozelska, Svetla
Svetla
Kozelska
European Food Safety Authority
Pautasso, Marco
Marco
Pautasso
European Food Safety Authority
Stancanelli, Giuseppe
Giuseppe
Stancanelli
European Food Safety Authority
Tramontini, Sara
Sara
Tramontini
European Food Safety Authority
Baù, Andrea
Andrea
Baù
European Food Safety Authority
Mosbach–Schulz, Olaf
Olaf
Mosbach–Schulz
European Food Safety Authority
Muñoz Guajardo, Irene
Irene
Muñoz Guajardo
European Food Safety Authority
Monguidi, Mario
Mario
Monguidi
European Food Safety Authority
Quan, Minh Ngoc
Minh Ngoc
Quan
BV-Tech
Almeida, Rodrigo
Rodrigo
Almeida
Department of Environmental Science, Policy and Management, University of California Berkeley, Berkeley, California, United States of America
Jacques, Marie-Agnès
Marie-Agnès
Jacques
IRHS, INRA, AGROCAMPUS OUEST, Université d'Angers, Beaucouzé, France
Lopes, Joao
Joao
Lopes
Departamento de Entomologia, ESALQ, Universidade de São Paulo, Piracicaba, São Paulo, Brazil
Nunney, Leonard
Leonard
Nunney
Department of Biology, University of California Riverside, Riverside, California, United States of America
Bragard, Claude
Claude
Bragard
Applied Microbiology-Phytopathology, Earth & Life Institute, Université Catholique de Louvain, Louvain-la-Neuve, Belgium
Thierry Candresse
Thierry Candresse
UMR 1332 Biologie du Fruit et Pathologie, INRA, Univ. Bordeaux, France
2020-04-28
eng
10.2903/j.efsa.2020.6114
10.5281/zenodo.1339343
https://zenodo.org/communities/efsa-kj
3
Creative Commons Attribution 4.0 International
Following a request from the European Commission, in 2015 EFSA created a database of host plant species of Xylella fastidiosa (EFSA, 2015). In 2018, a renovated and updated database of Xylella spp. (including both species X. fastidiosa and X. taiwanensis) and the related scientific report were published (EFSA, 2018). EFSA is going to maintain and update this database periodically.
In April 2020, EFSA released a new update of the Xylella spp. host plants database with information retrieved from literature search up to June 2019, Europhyt outbreak notifications up to 15 October 2019, and personal communications of experts (EFSA, 2020). The applied protocol for the extensive literature review, data collection and reporting, as well as results and lists of host plants are described in detail in the scientific report (EFSA, 2020).
The current database includes 343 host plants species in which the infection was assessed with at least two highly reliable detection methods (category A – see section 2.5.2 of EFSA (2020)), up to 595 host plants (regardless the detection methods applied – category E, see section 2.5.2 of EFSA (2020 ).
The Excel Files here attached represent the VERSION 3 of the Xylella spp. host plants database. For a detailed description of the information included in the database, please consult the related scientific report (EFSA, 2020).
The Excel file “Xylella spp. host plants database - VERSION 3” contains several sheets: the LEGENDA (with extensive description of each table), the full detailed raw data of the Xylella spp. host plant database (sheet “observation”) and several examples of data extraction.
Additional Excel files contain lists of host plant species of X. fastidiosa (subsp. unknown (i.e. not reported), fastidiosa, multiplex, pauca, morus, sandyi, tashke, fastidiosa/sandyi) and X. taiwanensis with different infection methods (natural, artificial and not specified, and according to different categories (A,B,C,D,E – see section 2.5.2 of EFSA (2020)).
Bibliography:
EFSA (European Food Safety Authority), 2015. Categorisation of plants for planting, excluding seeds, according to the risk of introduction of Xylella fastidiosa. EFSA Journal 2015;13(3):4061, 31 pp. doi:10.2903/j.efsa.2015.4061
EFSA (European Food Safety Authority), 2018. Scientific report on the update of the Xylella spp. host plant database. EFSA Journal 2018;16(9):5408, 87 pp. https://doi.org/10.2903/j.efsa.2018.5408
EFSA (European Food Safety Authority), 2020. Scientific report on the update of the Xylella spp. host plant database – systematic literature search up to 30 June 2019. EFSA Journal 2020;18(4):6114, 61 pp. https://doi.org/10.2903/j.efsa.2020.6114
alpha@efsa.europa.eu