Published March 31, 2020
| Version 2.0
Dataset
Open
Illumina reads SARS-Cov-2 using amplicon enrichment
- 1. ISCIII
Description
Testing data for nf-core/viralrecon pipeline
.Here we share two samples with illumina reads obtained from a enrichment experiment using Artic network amplicons V1 for SARS-Cov-2 virus. We also share the fasta and bed file with the localization of the primers in the virus genome.
The library has been constructed performing the next steps:
- Amplicon creation.
- Illumina library generation. No fragmentation, only adaptor and indexes.
- MiSeq 2x300 sequencing.
Files
Files
(761.2 MB)
| Name | Size | Download all |
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md5:e00caca9a393e9346d0bee37a2470758
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9.1 kB | Download |
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md5:dc1d9c74c500573927841e0188dd96b7
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8.8 kB | Download |
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md5:74fd9818b4c49c918a0f185c67ff0b67
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199.2 MB | Download |
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md5:c805baf5181dc0f9be059b9cb722481a
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236.5 MB | Download |
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md5:ca3cc4753d9310d7e8140be9766f114b
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149.7 MB | Download |
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md5:cc0ae17430065c18a7db90347c534e54
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175.8 MB | Download |
Additional details
Related works
- Is compiled by
- Software: github.com/nf-core/viralrecon (Handle)