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Code used in article "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics".

Fekonja, Lucius Samo; Wang, Ziqian; Aydogan, Dogu Baran; Roine, Timo; Engelhardt, Melina; Dreyer, Felix R.; Vajkoczy, Peter; Picht, Thomas


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    "description": "<p>Here we publish the code used in our &quot;<strong>Detecting corticospinal tract impairment</strong><strong>&nbsp;in tumor patients with fiber density and tensor-based metrics</strong>&quot; article.</p>\n\n<p>The code for MRtrix3 is based on version&nbsp;3.0_RC3_latest-66-g323bc8ac&nbsp;64 bit release version, built Dec 11 2019 (https://github.com/MRtrix3/mrtrix3).</p>\n\n<p>The code for R is based on&nbsp;RStudio&nbsp;Version&nbsp;1.2.5019, with&nbsp;R version 3.6.1 (2019-07-05) -- &quot;Action of the Toes&quot;,&nbsp;Copyright (C) 2019.&nbsp;The R Foundation for Statistical Computing.&nbsp;Platform: x86_64-apple-darwin15.6.0 (64-bit).</p>\n\n<p>&nbsp;</p>", 
    "license": {
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    "title": "Code used in article \"Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics\".", 
    "notes": "The authors acknowledge the support of the Cluster of Excellence Matters of Activity. Image Space Material funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany\u00b4s Excellence Strategy \u2013 EXC 2025.", 
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    "keywords": [
      "Tractography", 
      "Neuroimaging", 
      "Corticospinal tract", 
      "Glioma", 
      "Motor function", 
      "Diffusion weighted MRI", 
      "MRI", 
      "Along tract statistical analysis"
    ], 
    "publication_date": "2020-03-29", 
    "creators": [
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        "orcid": "0000-0003-1973-4410", 
        "affiliation": "Charit\u00e9 \u2013 Universit\u00e4tsmedizin Berlin", 
        "name": "Fekonja, Lucius Samo"
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        "orcid": "0000-0001-6675-6407", 
        "affiliation": "Charit\u00e9 \u2013 Universit\u00e4tsmedizin Berlin", 
        "name": "Wang, Ziqian"
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      {
        "orcid": "0000-0002-7840-3294", 
        "affiliation": "Aalto University School of Science", 
        "name": "Aydogan, Dogu Baran"
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        "orcid": "0000-0002-3104-9734", 
        "affiliation": "Aalto University School of Science", 
        "name": "Roine, Timo"
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        "orcid": "0000-0002-2921-6329", 
        "affiliation": "Charit\u00e9 \u2013 Universit\u00e4tsmedizin Berlin", 
        "name": "Engelhardt, Melina"
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        "orcid": "0000-0003-1560-8126", 
        "affiliation": "Freie Universit\u00e4t Berlin", 
        "name": "Dreyer, Felix R."
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        "orcid": "0000-0003-4350-392X", 
        "affiliation": "Charit\u00e9 \u2013 Universit\u00e4tsmedizin Berlin", 
        "name": "Vajkoczy, Peter"
      }, 
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        "orcid": "0000-0002-8630-1466", 
        "affiliation": "Charit\u00e9 \u2013 Universit\u00e4tsmedizin Berlin", 
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