Dataset Open Access
Data for Precursor intensity-based label-free quantification software tools for Galaxy Platform.
Subina Mehta
Precursor intensity-based label-free quantification software tools for proteomic and multi-omic analysis within the Galaxy Platform.
ABRF: Data was generated through the collaborative work of the ABRF Proteomics Research Group (https://abrf.org/research-group/proteomics-research-group-prg). See Reference for details: Van Riper, S. et al. ‘An ABRF-PRG study: Identification of low abundance proteins in a highly complex protein sample’ at the 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX."
UPS: MaxLFQ Cox J, Hein MY, Luber CA, Paron I, Nagaraj N, Mann M. Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ. Mol Cell Proteomics. 2014 Sep;13(9):2513-26. doi: 10.1074/mcp.M113.031591. Epub 2014 Jun 17. PubMed PMID: 24942700; PubMed Central PMCID: PMC4159666;
PRIDE #5412; ProteomeXchange repository PXD000279: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/09/PXD000279
| Name | Size | |
|---|---|---|
|
Input FIles.zip
md5:c50f5b25663304b830e96788a635a34d |
3.4 GB | Download |
|
Output FIles.zip
md5:3224b99a388d49bdf3d987e5f5d0bff4 |
2.6 GB | Download |
| All versions | This version | |
|---|---|---|
| Views | 62 | 62 |
| Downloads | 11 | 11 |
| Data volume | 33.1 GB | 33.1 GB |
| Unique views | 59 | 59 |
| Unique downloads | 10 | 10 |
- Publication date:
- March 31, 2020
- DOI:
-
- Keyword(s):
- Proteomics, label-free quantification, Galaxy framework, workflows
- License (for files):
- Creative Commons Attribution 4.0 International