Dataset Open Access

Training data for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial (Galaxy Training Material)

Maier, Wolfgang


DCAT Export

<?xml version='1.0' encoding='utf-8'?>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:adms="http://www.w3.org/ns/adms#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:dctype="http://purl.org/dc/dcmitype/" xmlns:dcat="http://www.w3.org/ns/dcat#" xmlns:duv="http://www.w3.org/ns/duv#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:frapo="http://purl.org/cerif/frapo/" xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#" xmlns:gsp="http://www.opengis.net/ont/geosparql#" xmlns:locn="http://www.w3.org/ns/locn#" xmlns:org="http://www.w3.org/ns/org#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:prov="http://www.w3.org/ns/prov#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:schema="http://schema.org/" xmlns:skos="http://www.w3.org/2004/02/skos/core#" xmlns:vcard="http://www.w3.org/2006/vcard/ns#" xmlns:wdrs="http://www.w3.org/2007/05/powder-s#">
  <rdf:Description rdf:about="https://doi.org/10.5281/zenodo.3732359">
    <rdf:type rdf:resource="http://www.w3.org/ns/dcat#Dataset"/>
    <dct:type rdf:resource="http://purl.org/dc/dcmitype/Dataset"/>
    <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://doi.org/10.5281/zenodo.3732359</dct:identifier>
    <foaf:page rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
    <dct:creator>
      <rdf:Description rdf:about="http://orcid.org/0000-0002-9464-6640">
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string">0000-0002-9464-6640</dct:identifier>
        <foaf:name>Maier, Wolfgang</foaf:name>
        <foaf:givenName>Wolfgang</foaf:givenName>
        <foaf:familyName>Maier</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>University of Freiburg</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:title>Training data for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial (Galaxy Training Material)</dct:title>
    <dct:publisher>
      <foaf:Agent>
        <foaf:name>Zenodo</foaf:name>
      </foaf:Agent>
    </dct:publisher>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#gYear">2020</dct:issued>
    <dcat:keyword>training</dcat:keyword>
    <dcat:keyword>Galaxy</dcat:keyword>
    <dcat:keyword>sequence analysis</dcat:keyword>
    <dcat:keyword>read mapping</dcat:keyword>
    <dcat:keyword>NGS</dcat:keyword>
    <dcat:keyword>Covid-19</dcat:keyword>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#date">2020-03-29</dct:issued>
    <dct:language rdf:resource="http://publications.europa.eu/resource/authority/language/ENG"/>
    <owl:sameAs rdf:resource="https://zenodo.org/record/3732359"/>
    <adms:identifier>
      <adms:Identifier>
        <skos:notation rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/3732359</skos:notation>
        <adms:schemeAgency>url</adms:schemeAgency>
      </adms:Identifier>
    </adms:identifier>
    <dct:isVersionOf rdf:resource="https://doi.org/10.5281/zenodo.3732358"/>
    <dct:description>&lt;p&gt;The data here is a copy of the corresponding SRR records in the NCBI SRA. The duplication serves a dual purpose:&lt;/p&gt; &lt;ol&gt; &lt;li&gt;as a backup should there be problems connecting to NCBI servers, e.g., during Galaxy user trainings.&lt;/li&gt; &lt;li&gt;to illustrate how to obtain raw sequencing data from alternative sources, and to organize the data into the same collection structure in a Galaxy history that is generated by specialized Galaxy SRA download tools.&lt;/li&gt; &lt;/ol&gt;</dct:description>
    <dct:accessRights rdf:resource="http://publications.europa.eu/resource/authority/access-right/PUBLIC"/>
    <dct:accessRights>
      <dct:RightsStatement rdf:about="info:eu-repo/semantics/openAccess">
        <rdfs:label>Open Access</rdfs:label>
      </dct:RightsStatement>
    </dct:accessRights>
    <dcat:distribution>
      <dcat:Distribution>
        <dct:license rdf:resource="https://creativecommons.org/licenses/by/4.0/legalcode"/>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>92376363</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10902284_ONT.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>35619476</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10903401_r1.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>40047142</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10903401_r2.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>52753769</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10903402_r1.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>59709075</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10903402_r2.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>299213705</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10948474_ONT.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>149299535</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10948550_ONT.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>1337046165</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10971381_r1.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.3732359"/>
        <dcat:byteSize>1390405939</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/3732359/files/SRR10971381_r2.fq.gz"/>
      </dcat:Distribution>
    </dcat:distribution>
  </rdf:Description>
</rdf:RDF>
4,544
3,565
views
downloads
All versions This version
Views 4,5444,544
Downloads 3,5653,565
Data volume 2.2 TB2.2 TB
Unique views 4,0124,012
Unique downloads 497497

Share

Cite as