Dataset Open Access

mGEMS Escherichia coli reference dataset

Mäklin, Tommi; Kallonen, Teemu; Alanko, Jarno; Mäklinen, Veli; Corander, Jukka; Honkela, Antti


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{
  "description": "<p>This dataset contains the <em>E. coli</em> sequences (assembled with shovill v0.9.0), their sequence type 131 sublineages, and accession numbers used in the mGEMS publication as the reference dataset.</p>", 
  "license": "https://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "affiliation": "University of Helsinki, Helsinki, Finland", 
      "@id": "https://orcid.org/0000-0003-0970-3514", 
      "@type": "Person", 
      "name": "M\u00e4klin, Tommi"
    }, 
    {
      "affiliation": "University of Oslo, Oslo, Norway", 
      "@id": "https://orcid.org/0000-0003-1741-6486", 
      "@type": "Person", 
      "name": "Kallonen, Teemu"
    }, 
    {
      "affiliation": "University of Helsinki, Helsinki, Finland", 
      "@id": "https://orcid.org/0000-0002-8003-9225", 
      "@type": "Person", 
      "name": "Alanko, Jarno"
    }, 
    {
      "affiliation": "University of Helsinki, Helsinki, Finland", 
      "@id": "https://orcid.org/0000-0003-4454-1493", 
      "@type": "Person", 
      "name": "M\u00e4klinen, Veli"
    }, 
    {
      "affiliation": "University of Oslo, Oslo, Norway", 
      "@id": "https://orcid.org/0000-0002-7752-1942", 
      "@type": "Person", 
      "name": "Corander, Jukka"
    }, 
    {
      "affiliation": "University of Helsinki, Helsinki, Finland", 
      "@id": "https://orcid.org/0000-0001-9193-8093", 
      "@type": "Person", 
      "name": "Honkela, Antti"
    }
  ], 
  "url": "https://zenodo.org/record/3724112", 
  "datePublished": "2020-03-23", 
  "version": "v1.0.0", 
  "keywords": [
    "escherichia coli", 
    "reference data", 
    "mGEMS"
  ], 
  "@context": "https://schema.org/", 
  "distribution": [
    {
      "contentUrl": "https://zenodo.org/api/files/087f8d0b-b705-49d5-8d5c-babb104d63f3/mGEMS-ecoli-reference-v1.0.0.tar.gz", 
      "encodingFormat": "gz", 
      "@type": "DataDownload"
    }
  ], 
  "identifier": "https://doi.org/10.5281/zenodo.3724112", 
  "@id": "https://doi.org/10.5281/zenodo.3724112", 
  "@type": "Dataset", 
  "name": "mGEMS Escherichia coli reference dataset"
}
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