Published February 20, 2020
| Version v1
Journal article
Restricted
Morphological identification and molecular validation of anchovies (Engraulidae) in the Persian Gulf and Oman Sea
Description
Afrand, Mahboobeh, Sourinejad, Iman, Fazeli, Seyed Abolhassan Shahzadeh, Akbarzadeh, Arash, Yeganeh, Laleh Parsa, Sadeghi, Maryam, Azarbaijani, Reza (2020): Morphological identification and molecular validation of anchovies (Engraulidae) in the Persian Gulf and Oman Sea. Zootaxa 4742 (2): 375-391, DOI: 10.11646/zootaxa.4742.2.10
Files
Restricted
The record is publicly accessible, but files are restricted to users with access.
Linked records
Additional details
Identifiers
- URL
- https://www.checklistbank.org/dataset/23876
- LSID
- urn:lsid:zoobank.org:pub:A0AE93A2-348E-4686-9B38-32ECED90C2EA
- LSID
- urn:lsid:plazi.org:pub:FFBFE940FFA3870C7D5CFF83FFF2FFBD
- URL
- http://publication.plazi.org/id/FFBFE940FFA3870C7D5CFF83FFF2FFBD
References
- Ajmal Khan, S., Lyla, P.S., Akbar John, B., Prasanna Kuamr, C., Murugan, S. & Jalal, K.C.A. (2010) DNA barcoding of Stolephorus indicus, Stolephorus commersonnii and Terapon jarbua of Parangipettai coastal waters. Biotechnology, 9 (3), 373-377. https://doi.org/10.3923/biotech.2010.373.377
- Al-Jufaili, S.M., Hermosa, G., Al-Shuaily, S.S. & Mujaini, A.A. (2010) Oman fish biodiversity. Journal of King Abdulaziz University, Marine Science, 21 (1), 3-51. https://doi.org/10.4197/Mar.21-1.1
- Bianchi, G. (1985) FAO species identification sheets for fishery purposes. Field guide to the commercial marine and brackishwater species of Pakistan. Prepared with the support of PAK/77/033 and FAO (FIRM) Regular Programme. FAO, Rome, 200 pp.
- Bloom, D.D. & Lovejoy, N.R. (2012) Molecular phylogenetics reveals a pattern of biome conservatism in New World anchovies (family Engraulidae). Journal of Evolutionary Biology, 25 (4), 701-715. https://doi.org/10.1111/j.1420-9101.2012.02464.x
- Briggs, J.C. & Bowen, B.W. (2012) A realignment of marine biogeographic provinces with particular reference to fish distributions. Journal of Biogeography, 39 (1), 12-30. https://doi.org/10.1111/j.1365-2699.2011.02613.x
- Carpenter, K.E., Krupp, F., Jones, D.A. & Zajonz, U. (1997) FAO species identification guide for fishery purposes. The living marine resources of Kuwait, Eastern Saudi Arabia, Bahrain, Qatar, and the United Arab Emirates. FAO, Rome, 293 pp.
- Dayrat, B. (2005) Towards integrative taxonomy. Biological Journal of the Linnean Society, 85 (3), 407-415. https://doi.org/10.1111/j.1095-8312.2005.00503.x
- Delfieh, P., Zohrehbakhsh, E., Owfi, F., Kazemian, M. & Delfieh, P. (2011) The overview study of Engraulididae and Pristigasteridae, two families of clupeiforms in the Persian Gulf and Oman Sea. Iranian Journal of Marine Biology, 3 (9), 41-52. [in Persian/abstract in English]
- Di Dario, F. (2009) Chirocentrids as engrauloids: evidence from suspensorium, branchial arches, and infraorbital bones (Clupeomorpha, Teleostei). Zoological Journal of the Linnean Society, 156 (2), 363-383. https://doi.org/10.1111/j.1096-3642.2008.00472.x
- Ebach, M.C. & Holdrege, C. (2005) DNA barcoding is no substitute for taxonomy. Nature, 434 (7034), 1-697. https://doi.org/10.1038/434697b
- Folmer, O., Black, M., Hoeh, W., Lutz, R. & Vrijenhoek, R. (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular marine biology and biotechnology, 3 (5), 294-299.
- Frezal, L. & Leblois, R. (2008) Four years of DNA barcoding: Current advances and prospects. Infection, Genetics and Evolution, 8 (5), 727-736. https://doi.org/10.1016/j.meegid.2008.05.005
- Fricke, R., Eschmeyer, W.N. & Van der Laan, R. (2020) Eschmeyer's catalog of fishes: genera, species, references. Available from: http://researcharchive. calacademy.org/research/catalog/ fishcatmain.asp. (accessed date 1 July 2019)
- Fricke, R., Golani, D. & Appelbaum-Golani, B. (2015) First record of the Indian anchovy Stolephorus indicus (van Hasselt, 1823) (Clupeiformes: Engraulidae) in the Mediterranean Sea. BioInvasions Records, 4 (4), 293-297. https://doi.org/10.3391/bir.2015.4.4.11
- Ganias, K. (2014) Biology and Ecology of Sardines and Anchovies. CRC Press, Taylor & Francis Group, Boca Raton, Florida, 382 pp.
- Hata, H. & Motomura, H. (2015) A new species of anchovy, Encrasicholina macrocephala (Clupeiformes: Engraulidae), from the northwestern Indian Ocean. Zootaxa, 3941 (1), 117-124. https://doi.org/10.11646/zootaxa.3941.1.6
- Hata, H. & Motomura, H. (2016) Two new species of the genus Encrasicholina (Clupeiformes: Engraulidae): E. intermedia from the western Indian Ocean and E. gloria from the Persian Gulf, Red Sea and Mediterranean. Raffles Bulletin of Zoology, 64, 79-88.
- Hata, H. & Motomura, H. (2017) Validity of Encrasicholina pseudoheteroloba (Hardenberg 1933) and redescription of Encrasicholina heteroloba (Ruppell 1837), a senior synonym of Encrasicholina devisi (Whitley 1940) (Clupeiformes: Engraulidae). Ichthyological Research, 64 (1), 18-28. https://doi.org/10.1007/s10228-016-0529-4
- Hata, H., Motomura, H. & Ishimori, H. (2012) First Japanese record of an engraulid fish, Encrasicholina devisi (Clupeiformes), collected from Kagoshima Prefecture, southern Japan and comparisons with congeners. Japanese Journal of Ichthyology, 59 (2), 125-134. https://doi.org/10.11369/jji.59.125
- Hebert, P.D.N., Cywinska, A., Ball, S.L. & deWaard, J.R. (2003) Biological identifications through DNA barcodes. Proceedings of the Royal Society Series B: Biological Sciences, 270 (1512), 313-321. https://doi.org/10.1098/rspb.2002.2218
- Hubert, N., Hanner, R., Holm, E., Mandrak, N.E., Taylor, E., Burridge, M., Watkinson, D., Dumont, P., Curry, A., Bentzen, P., Zhang, J., April, J. & Bernatchez, L. (2008) Identifying Canadian freshwater fishes through DNA barcodes. PLoS ONE, 3 (6), e2490. https://doi.org/10.1371/journal.pone.0002490
- Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16 (2), 111-120. https://doi.org/10.1007/BF01731581
- Lakra, W.S., Singh, M., Goswami, M., Gopalakrishnan, A., Lal, K.K., Mohindra, V., Sarkar, U.K., Punia, P.P., Singh, K.V., Bhatt, J.P. & Ayyappan. S. (2016) DNA barcoding Indian freshwater fishes. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 27 (6), 4510-4517. https://doi.org/10.3109/19401736.2015.1101540
- Landi, M., Dimech, M., Arculeo, M., Biondo, G., Martins, R., Carneiro, M., Carvalho, G.R., Brutto, S.L. & Costa, F.O. (2014) DNA barcoding for species assignment: the case of Mediterranean marine fishes. PLoS ONE, 9 (9), e106135. https://doi.org/10.1371/journal.pone.0106135
- Lavoue, S., Miya, M. & Nishida, M. (2010) Mitochondrial phylogenomics of anchovies (family Engraulidae) and recurrent origins of pronounced miniaturization in the order Clupeiformes. Molecular Phylogenetics and Evolution, 56 (1), 480-485. https://doi.org/10.1016/j.ympev.2009.11.022
- Lefebure, T., Douady, C.J., Gouy, M. & Gibert, J. (2006) Relationship between morphological taxonomy and molecular divergence within Crustacea: proposal of a molecular threshold to help species delimitation. Molecular Phylogenetics and Evolution, 40 (2), 435-447. https://doi.org/10.1016/j.ympev.2006.03.014
- Ma, C., Ma, L., Ni, Y., Shen, A., Zhang, Y., Zhang, F. & Zhao, Y. (2010) Phylogenetic relationship of Thryssa inferred from morphologic characteristic and mitochondrial 16 S rRNA gene sequences. Journal of Fishery Sciences of China, 17 (3), 471-477.
- Ma, C.Y., Ma, H.Y., Ni, Y., Wang, W. & Ma, L.B. (2015) Molecular identification of the genus Thryssa based on DNA barcoding. Genetics and Molecular Research, 14 (4), 18580-18586. https://doi.org/10.4238/2015.December.28.5
- Pappalardo, A.M. & Ferrito, V. (2015) DNA barcoding species identification unveils mislabeling of processed flatfish products in southern Italy markets. Fisheries Research, 164, 153-158. https://doi.org/10.1016/j.fishres.2014.11.004
- Psomadakis, P.N., Osmany, H.B. & Moazzam, M. (2015) FAO species identification guide for fishery purposes. The living marine resources of Pakistan. FAO, Rome, 386 pp.
- Rajpoot, A., Kumar, V.P., Bahuguna, A. & Kumar, D. (2016) DNA barcoding and traditional taxonomy:An integrative approach. International Journal of Current Research, 8 (11), 42025-42031.
- Randall, J.E. (1995) Coastal fishes of Oman. University of Hawaii Press, Honolulu, 432 pp.
- Ribeiro, A.O., Caires, R.A., Mariguela, T.C., Pereira, L.H.G., Hanner, R. & Oliveira, C. (2012) DNA barcodes identify marine fishes of Sao Paulo State, Brazil. Molecular Ecology Resources, 12 (6), 1012-1020. https://doi.org/10.1111/1755-0998.12007
- Salarpour, A., Darvishi, M., Behzadi, S. & Seraji, F. (2008) Reproduction and feeding of buccaneer anchovy (Encrasicholina punctifer) from coastal waters of Qeshm Island, the Persian Gulf. Iranian Scientific Fisheries Journal, 17 (1), 45-54. [in Persian/abstract in English]
- Santos, M., Hata, H., Belga, P.B., Lanzuela, N., Buccat, F.G.A., Villanueva, J.A., Villarao, M.C., Doyola, M.C., Deligero, R., Alcantara, M., Gatlabayan, L.V., Lopez, G., Parido, L. & Gapuz, A.V. (2017) Encrasicholina pseudoheteroloba. The IUCN red list of threatened species. Available from: http://dx.doi.org/10.2305/IUCN.UK.2017-3.RLTS.T103422139A103422186.en (accessed 5 February 2020)
- Sembiring, A., Pertiwi, N.P.D., Mahardini, A., Wulandari, R., Kurniasih, E.M., Kuncoro, A.W., Cahyani, N.K.D., Anggoro, A.W. Ulfa, M., Madduppa, H., Carpenter, K.E., Barber, P.H. & Mahardika, G.N. (2015) DNA barcoding reveals targeted fisheries for endangered sharks in Indonesia. Fisheries Research, 164, 130-134. https://doi.org/10.1016/j.fishres.2014.11.003
- Sharawy, Z.Z., Abbas, E.M., Khafage, A.R., Galal-Khallaf, A., Ismail, R.F., Ahmed, H.O., Mohammed-Geba, K. & Kato, M. (2017) Descriptive analysis, DNA barcoding and condition index of Penaeids (Crustacea: Decapoda) from the Egyptian Mediterranean coast. Fisheries Research, 188, 6-16. https://doi.org/10.1016/j.fishres.2016.12.007
- Steinke, D., deWaard, J.R., Gomon, M.F., Johnson, J.W., Larson, H.K., Lucanus, O., Moore, G.I., Reader, S. & Ward, R.D. (2017) DNA barcoding the fishes of Lizard Island (Great Barrier Reef). Biodiversity Data Journal, 5, e12409. https://doi.org/10.3897/BDJ.5.e12409
- Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution, 30 (12), 2725-2729. https://doi.org/10.1093/molbev/mst197
- Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22 (22), 4673-4680. https://doi.org/10.1093/nar/22.22.4673
- Tzeng, C-H. & Chiu, T-S. (2012) DNA barcode-based identification of commercially caught cutlassfishes (Family: Trichiuridae) with a phylogenetic assessment. Fisheries Research, 127-128, 176-181. https://doi.org/10.1016/j.fishres.2012.01.022
- Wang, H-Y., Dong, C.A. & Lin, H-C. (2017) DNA barcoding of fisheries catch to reveal composition and distribution of cutlassfishes along the Taiwan coast. Fisheries Research, 187, 103-109. https://doi.org/10.1016/j.fishres.2016.11.015
- Ward, R.D., Hanner, R. & Hebert, P.D. (2009) The campaign to DNA barcode all fishes, FISH-BOL. Journal of fish biology, 74 (2), 329-356. https://doi.org/10.1111/j.1095-8649.2008.02080.x
- Whitehead, P.J.P. (1985) FAO species catalogue. 7 (125), Clupeoid fishes of the world. An annotated and illustrated catalogue of the herrings, sardines, pilchards, sprats, anchovies and wolfherrings. Part 1. Chirocentridae, Clupeidae and Pristigasteridae. FAO Fisheries Synopsis, Rome, 303 pp.
- Whitehead, P.J.P., Nelson, G.J. & Wongratana, T. (1988) FAO species catalogue. 7 (125). Clupeoid fishes of the world. An annotated and illustrated catalogue of the herrings, sardines, pilchards, sprats, anchovies and wolfherrings. Part 2. Engraulididae. FAO Fisheries Synopsis, Rome, pp. 305-579.
- Wongratana, T. (1980 ) Systematics of clupeoid fishes of the Indo-Pacific region. Ph.D. thesis, Faculty of Science, University of London, London, 923 pp.
- Wongratana, T. (1983) Diagnoses of 24 new species and proposal of a new name for a species of Indo-Pacific Clupeoid fishes. Japanese Journal of Ichthyology, 29 (4), 385-407. https://doi.org/10.11369/jji1950.29.385
- Zhang, J. (2011) Species identification of marine fishes in China with DNA barcoding. Evidence-based Complementary and Alternative Medicine, 2215 (978253), 1-10. https://doi.org/10.1155/2011/978253
- Zhang, J-B. & Hanner, R. (2011) DNA barcoding is a useful tool for the identification of marine fishes from Japan. Biochemical Systematics and Ecology, 39 (1), 31-42. https://doi.org/10.1016/j.bse.2010.12.017