10.5281/zenodo.3666344
https://zenodo.org/records/3666344
oai:zenodo.org:3666344
Solenn Stoeckel
Solenn Stoeckel
0000-0001-6064-5941
INRAE, Rennes
Barbara Porro
Barbara Porro
Université de Nice
Sophie Arnaud-Haond
Sophie Arnaud-Haond
Ifremer, Sète
The discernible and hidden effects of clonality on the genotypic and genetic states of populations: improving our estimation of clonal rates
Zenodo
2020
population genetics, genotypic diversity, reproductive mode, asexuality, rates of clonality, F-statistics, sampling
2020-02-13
10.5281/zenodo.3666343
Creative Commons Attribution 4.0 International
Partial clonality is widespread across the tree of life, but most population genetics models are designed for exclusively clonal or sexual organisms. This gap hampers our understanding of the influence of clonality on evolutionary trajectories and the interpretation of population genetics data. We performed forward simulations of diploid populations at increasing rates of clonality (c), analysed their relationships with genotypic (clonal richness, R, and distribution of clonal sizes, Pareto β) and genetic (FIS and linkage disequilibrium) indices, and tested predictions of c from population genetics data through supervised machine learning. Here are the numerical results form those simulations.