Software Open Access

FGTpartitioner: A rapid method for parsimonious delimitation of ancestry breakpoints in large genome-wide SNP datasets

Tyler K. Chafin


DataCite XML Export

<?xml version='1.0' encoding='utf-8'?>
<resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4.1/metadata.xsd">
  <identifier identifierType="DOI">10.5281/zenodo.3635843</identifier>
  <creators>
    <creator>
      <creatorName>Tyler K. Chafin</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-8687-5905</nameIdentifier>
      <affiliation>University of Arkansas</affiliation>
    </creator>
  </creators>
  <titles>
    <title>FGTpartitioner: A rapid method for parsimonious delimitation of ancestry breakpoints in large genome-wide SNP datasets</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2020</publicationYear>
  <dates>
    <date dateType="Issued">2020-02-04</date>
  </dates>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/3635843</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.3635842</relatedIdentifier>
  </relatedIdentifiers>
  <version>v1.0.1</version>
  <rightsList>
    <rights rightsURI="https://opensource.org/licenses/AGPL-3.0">GNU Affero General Public License v3.0 or later</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;FGTpartitioner is a software for the rapid partitioning of full-genome sequence alignments into &amp;#39;recombination-free&amp;#39; segments using minimal analytical assumptions. In doing so, FGTpartitioner provides a means for simple and rapid block delimitation in genome-wide datasets as a pretext for phylogenomic analysis, thus increasing accessibility of phylogenomic methods to researchers studying non-model species. Source code:&amp;nbsp;https://github.com/tkchafin/FGTpartitioner&lt;/p&gt;</description>
  </descriptions>
</resource>
12
1
views
downloads
All versions This version
Views 1212
Downloads 11
Data volume 193.0 kB193.0 kB
Unique views 1212
Unique downloads 11

Share

Cite as