Dataset Open Access

Reactome HSA v71 pathways and hierarchy

Richard Tjörnhammar; Edward Tjörnhammar


JSON-LD (schema.org) Export

{
  "description": "<p>Originally from:<strong> https://reactome.org/download-data</strong><br>\nVersion 71: <strong>https://reactome.org/about/news/145-version-71-releases</strong></p>\n\n<p>What was done here:<br>\nTop pathways found in <strong>https://reactome.org/PathwayBrowser/</strong> were manually added as children to the parent R-HSA-0000000 in the file &quot;NewestReactomeNodeRelations.txt&quot;. These top pathway descriptions were also added to the file &quot;Top_Human_REACTOME_Nodes_ManualCuration.txt&quot;</p>\n\n<p>The rest of the pathway parent child relationships were taken from:<br>\n<strong>https://reactome.org/download/current/ReactomePathwaysRelation.txt</strong><br>\nbut only the R-HSA pathways were used and added to the file &quot;NewestReactomeNodeRelations.txt&quot;</p>\n\n<p>The pathway definitions are the ones found in<br>\n&quot;Ensembl2Reactome_All_Levels_v71.txt&quot;<br>\n&nbsp;</p>", 
  "license": "https://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "@type": "Person", 
      "name": "Richard Tj\u00f6rnhammar"
    }, 
    {
      "@type": "Person", 
      "name": "Edward Tj\u00f6rnhammar"
    }
  ], 
  "url": "https://zenodo.org/record/3608712", 
  "datePublished": "2020-01-15", 
  "@context": "https://schema.org/", 
  "distribution": [
    {
      "contentUrl": "https://zenodo.org/api/files/70cab9f4-5a10-43b0-9994-0bf26e506b11/Reactome_v71_pathways_with_top_node_relations.zip", 
      "encodingFormat": "zip", 
      "@type": "DataDownload"
    }
  ], 
  "identifier": "https://doi.org/10.5281/zenodo.3608712", 
  "@id": "https://doi.org/10.5281/zenodo.3608712", 
  "@type": "Dataset", 
  "name": "Reactome HSA v71 pathways and hierarchy"
}
98
16
views
downloads
All versions This version
Views 9898
Downloads 1616
Data volume 201.3 MB201.3 MB
Unique views 5353
Unique downloads 1515

Share

Cite as