Dataset Open Access

Reactome HSA v71 pathways and hierarchy

Richard Tjörnhammar; Edward Tjörnhammar


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.3608712", 
  "author": [
    {
      "family": "Richard Tj\u00f6rnhammar"
    }, 
    {
      "family": "Edward Tj\u00f6rnhammar"
    }
  ], 
  "issued": {
    "date-parts": [
      [
        2020, 
        1, 
        15
      ]
    ]
  }, 
  "abstract": "<p>Originally from:<strong> https://reactome.org/download-data</strong><br>\nVersion 71: <strong>https://reactome.org/about/news/145-version-71-releases</strong></p>\n\n<p>What was done here:<br>\nTop pathways found in <strong>https://reactome.org/PathwayBrowser/</strong> were manually added as children to the parent R-HSA-0000000 in the file &quot;NewestReactomeNodeRelations.txt&quot;. These top pathway descriptions were also added to the file &quot;Top_Human_REACTOME_Nodes_ManualCuration.txt&quot;</p>\n\n<p>The rest of the pathway parent child relationships were taken from:<br>\n<strong>https://reactome.org/download/current/ReactomePathwaysRelation.txt</strong><br>\nbut only the R-HSA pathways were used and added to the file &quot;NewestReactomeNodeRelations.txt&quot;</p>\n\n<p>The pathway definitions are the ones found in<br>\n&quot;Ensembl2Reactome_All_Levels_v71.txt&quot;<br>\n&nbsp;</p>", 
  "title": "Reactome HSA v71 pathways and hierarchy", 
  "type": "dataset", 
  "id": "3608712"
}
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