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Published November 21, 2019 | Version 2.5.0-RC2
Software Open

GMOD/Apollo: 2.5.0-RC2

  • 1. Lawrence Berkeley National Lab
  • 2. LBNL
  • 3. Genomancer
  • 4. TISLab, OSU
  • 5. BIPAA/GenOuest
  • 6. OHSU Computational Biology Department
  • 7. Wellcome Sanger Institute
  • 8. WormBase
  • 9. UC Berkeley
  • 10. Gitter
  • 11. EBI
  • 12. Uni of Cambridge / @PomBase
  • 13. @TAMU-CPT

Description

This is an untested release candidate 2 of 2.5.0. Please download and test. Report issues https://github.com/GMOD/Apollo/issues

Major features include:

  • Moved blat / blast search to its own tab 2259
  • Allow creation of annotations from blat features 2225
  • On upload of fasta file execute faToTwoBit if present to create searchable blat file 2262
  • Allows history tracking for non-structural edits 2246

There are numerous bug fixes and web-service fixes. More changes can be found here: https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md

Docker builds are on quay.io and docker hub:

https://quay.io/repository/gmod/apollo?tab=builds https://hub.docker.com/r/gmod/apollo Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/latest/

Note: You can find a guide upgrading existing Apollo installations here: https://genomearchitect.readthedocs.io/en/latest/Migration.html

Active mailing list (apollo@lbl.gov) and google group.

Files

GMOD/Apollo-2.5.0-RC2.zip

Files (93.9 MB)

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md5:3bb92496695c9ad2bd193af5f637f165
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Additional details

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