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GMOD/Apollo: 2.4.2-RC1

Nathan Dunn; Colin Diesh; Deepak; S2KFan; Gregg Helt; Robert Buels; Monica Munoz-Torres; Yating Liu; Helena Rasche; Anthony Bretaudeau; Stephen Ficklin; Justin Reese; luke; hsiao yi; Robert Syme; NehaVC; Tim Stickland; Michael Paulini; wesleyemason; Jun-Wei Lin; Eric Y; childers; The Gitter Badger; Mikkel Christensen; Liam Gretton; Kim Rutherford; Cory Maughmer; Aymeric Naômé

This is an untested release candidate of 2.4.1. Please download and test. Report issues https://github.com/GMOD/Apollo/issues

Major features include:

  • Moved blat / blast search to its own tab 2259
  • Allow creation of annotations from blat features 2225
  • On upload of fasta file execute faToTwoBit if present to create searchable blat file 2262
  • Allows history tracking for non-structural edits 2246

There are numerous bug fixes and web-service fixes. More changes can be found here: https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md

Docker builds are on quay.io and docker hub:

https://quay.io/repository/gmod/apollo?tab=builds https://hub.docker.com/r/gmod/apollo Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/latest/

Note: You can find a guide upgrading existing Apollo installations here: https://genomearchitect.readthedocs.io/en/latest/Migration.html

Please open a GitHub issue if you find any problems: https://github.com/GMOD/Apollo/issues/

Active mailing list (apollo@lists.lbl.gov) and archive.

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