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JXing-Lab/nanopore-sv-evaluation: Code and data

Xing Lab of Genomics


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{
  "description": "<p>This release contains codes and data used for the publication \"Evaluating nanopore sequencing data processing pipelines for structure variation identification\".</p>\n<p>nanopore-pipeline.sif is a container includes all nanopore pipelines and random forest classifier.\nFor details, see <a href=\"https://github.com/JXing-Lab/nanopore-sv-evaluation/blob/master/singularity/readme.md\">https://github.com/JXing-Lab/nanopore-sv-evaluation/blob/master/singularity/readme.md</a></p>\n<p>CallSets.zip included all the SV called by the 7 pipelines.</p>\n<p>Simulation_Chr20 includes the modified GRCh38 Chr20 genome with artificial SV insertions and deletions, the simulated true sets, and the training profile for NanoSim read simulation.</p>", 
  "license": "", 
  "creator": [
    {
      "affiliation": "Rutgers, The State University of New Jersey", 
      "@type": "Person", 
      "name": "Xing Lab of Genomics"
    }
  ], 
  "url": "https://zenodo.org/record/3473501", 
  "codeRepository": "https://github.com/JXing-Lab/nanopore-sv-evaluation/tree/1.0", 
  "datePublished": "2019-10-04", 
  "version": "1.0", 
  "@context": "https://schema.org/", 
  "identifier": "https://doi.org/10.5281/zenodo.3473501", 
  "@id": "https://doi.org/10.5281/zenodo.3473501", 
  "@type": "SoftwareSourceCode", 
  "name": "JXing-Lab/nanopore-sv-evaluation: Code and data"
}
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