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JXing-Lab/nanopore-sv-evaluation: Code and data

Xing Lab of Genomics


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.3473501", 
  "title": "JXing-Lab/nanopore-sv-evaluation: Code and data", 
  "issued": {
    "date-parts": [
      [
        2019, 
        10, 
        4
      ]
    ]
  }, 
  "abstract": "<p>This release contains codes and data used for the publication \"Evaluating nanopore sequencing data processing pipelines for structure variation identification\".</p>\n<p>nanopore-pipeline.sif is a container includes all nanopore pipelines and random forest classifier.\nFor details, see <a href=\"https://github.com/JXing-Lab/nanopore-sv-evaluation/blob/master/singularity/readme.md\">https://github.com/JXing-Lab/nanopore-sv-evaluation/blob/master/singularity/readme.md</a></p>\n<p>CallSets.zip included all the SV called by the 7 pipelines.</p>\n<p>Simulation_Chr20 includes the modified GRCh38 Chr20 genome with artificial SV insertions and deletions, the simulated true sets, and the training profile for NanoSim read simulation.</p>", 
  "author": [
    {
      "family": "Xing Lab of Genomics"
    }
  ], 
  "version": "1.0", 
  "type": "article", 
  "id": "3473501"
}
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