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scikit-survival

Sebastian Pölsterl


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<resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4.1/metadata.xsd">
  <identifier identifierType="DOI">10.5281/zenodo.3384168</identifier>
  <creators>
    <creator>
      <creatorName>Sebastian Pölsterl</creatorName>
    </creator>
  </creators>
  <titles>
    <title>scikit-survival</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2019</publicationYear>
  <subjects>
    <subject>survival-analysis</subject>
    <subject>machine-learning</subject>
    <subject>python</subject>
    <subject>scikit-learn</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2019-09-02</date>
  </dates>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/3384168</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsSupplementTo">https://github.com/sebp/scikit-survival/tree/v0.10</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.3352342</relatedIdentifier>
  </relatedIdentifiers>
  <version>v0.10</version>
  <rightsList>
    <rights rightsURI="http://www.opensource.org/licenses/GPL-3.0">GNU General Public License v3.0 only</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This release adds the &lt;em&gt;ties&lt;/em&gt; argument to &lt;a href="https://scikit-survival.readthedocs.io/en/latest/generated/sksurv.linear_model.CoxPHSurvivalAnalysis.html#sksurv.linear_model.CoxPHSurvivalAnalysis"&gt;sksurv.linear_model.CoxPHSurvivalAnalysis&lt;/a&gt; to choose between Breslow's and Efron's likelihood in the presence of tied event times. Moreover, &lt;a href="https://scikit-survival.readthedocs.io/en/latest/generated/sksurv.compare.compare_survival.html#sksurv.compare.compare_survival"&gt;sksurv.compare.compare_survival()&lt;/a&gt; has been added, which implements the log-rank hypothesis test for comparing the survival function of 2 or more groups.&lt;/p&gt;
Enhancements
&lt;ul&gt;
&lt;li&gt;Update API doc of predict function of boosting estimators (#75).&lt;/li&gt;
&lt;li&gt;Clarify documentation for GradientBoostingSurvivalAnalysis (#78).&lt;/li&gt;
&lt;li&gt;Implement Efron's likelihood for handling tied event times.&lt;/li&gt;
&lt;li&gt;Implement log-rank test for comparing survival curves.&lt;/li&gt;
&lt;li&gt;Add support for scipy 1.3.1 (#66).&lt;/li&gt;
&lt;/ul&gt;
Bug fixes
&lt;ul&gt;
&lt;li&gt;Re-add &lt;em&gt;baseline&lt;em&gt;survival&lt;/em&gt;&lt;/em&gt; and &lt;em&gt;cum_baseline&lt;em&gt;hazard&lt;/em&gt;&lt;/em&gt; attributes to &lt;a href="https://scikit-survival.readthedocs.io/en/latest/generated/sksurv.linear_model.CoxPHSurvivalAnalysis.html#sksurv.linear_model.CoxPHSurvivalAnalysis"&gt;sksurv.linear_model.CoxPHSurvivalAnalysis&lt;/a&gt; (#76).&lt;/li&gt;
&lt;/ul&gt;</description>
  </descriptions>
</resource>
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