Dataset Open Access

Design and in vitro realization of carbon-conserving photorespiration - Computational Analysis

Trudeau, Devin L.; Edlich-Muth, Christian; Zarzycki, Jan; Scheffen, Marieke; Goldsmith, Moshe; Khersonsky, Olga; Avizemer, Ziv; Fleishman, Sarel J.; Cotton, Charles A.R; Erb, Tobias J.; Tawfik, Dan S.; Bar-Even, Arren


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.3373445", 
  "language": "eng", 
  "title": "Design and in vitro realization of carbon-conserving photorespiration - Computational Analysis", 
  "issued": {
    "date-parts": [
      [
        2018, 
        11, 
        19
      ]
    ]
  }, 
  "abstract": "<p>Our aim is to develop a framework for modeling C3 photosynthesis&nbsp;in mesophyll cells that allows us to compare native photorespiration with engineered photosynthetic shunts. In particular, we want to model conditions that are most relevant to agricultural crops, i.e. a range of light intensities and both ambient and low CO2 intercellular airspace concentrations. Here we presented our computational analysis based on pathSeekR, the stoichiometric-kinetic model,&nbsp; kinetic models of photorespiration shunts and pathSeekR pathway architectures.&nbsp;</p>", 
  "author": [
    {
      "family": "Trudeau, Devin L."
    }, 
    {
      "family": "Edlich-Muth, Christian"
    }, 
    {
      "family": "Zarzycki, Jan"
    }, 
    {
      "family": "Scheffen, Marieke"
    }, 
    {
      "family": "Goldsmith, Moshe"
    }, 
    {
      "family": "Khersonsky, Olga"
    }, 
    {
      "family": "Avizemer, Ziv"
    }, 
    {
      "family": "Fleishman, Sarel J."
    }, 
    {
      "family": "Cotton, Charles A.R"
    }, 
    {
      "family": "Erb, Tobias J."
    }, 
    {
      "family": "Tawfik, Dan S."
    }, 
    {
      "family": "Bar-Even, Arren"
    }
  ], 
  "note": "Supplementary Material to https://doi.org/10.1073/pnas.1812605115", 
  "type": "dataset", 
  "id": "3373445"
}
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