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nextgenusfs/amptk: amptk v1.4.1

Jon Love; Jon Palmer; Jason Stajich; Franzwagner Ternus; Vladimir Mikryukov


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  <identifier identifierType="DOI">10.5281/zenodo.3357288</identifier>
  <creators>
    <creator>
      <creatorName>Jon Love</creatorName>
      <affiliation>@RedVentures</affiliation>
    </creator>
    <creator>
      <creatorName>Jon Palmer</creatorName>
      <affiliation></affiliation>
    </creator>
    <creator>
      <creatorName>Jason Stajich</creatorName>
      <affiliation>University of California-Riverside</affiliation>
    </creator>
    <creator>
      <creatorName>Franzwagner Ternus</creatorName>
      <affiliation></affiliation>
    </creator>
    <creator>
      <creatorName>Vladimir Mikryukov</creatorName>
      <affiliation>IPAE</affiliation>
    </creator>
  </creators>
  <titles>
    <title>nextgenusfs/amptk: amptk v1.4.1</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2019</publicationYear>
  <dates>
    <date dateType="Issued">2019-08-01</date>
  </dates>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/3357288</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsSupplementTo">https://github.com/nextgenusfs/amptk/tree/1.4.1</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.594561</relatedIdentifier>
  </relatedIdentifiers>
  <version>1.4.1</version>
  <rightsList>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;ul&gt;
&lt;li&gt;bug fix for &lt;code&gt;amptk summarize&lt;/code&gt; if taxonomy not present #57 &lt;/li&gt;
&lt;li&gt;add FASTA extraction step to install #59 &lt;/li&gt;
&lt;li&gt;add chimera detection options to dada2 #60 &lt;/li&gt;
&lt;li&gt;fix DADA2 for ion torrent data, in newer versions of dada2 the quality score issue has been fixed, so can now use quality scores during sample inference. &lt;/li&gt;
&lt;/ul&gt;</description>
  </descriptions>
</resource>
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