motif_ID	intersection_regions	pipeline_a_wt_regions	pipeline_b_regions	ratio	alt_ID
1	idMA0773.1	1000	1827	1006	0.5473453749315819	MEF2D
2	idMA0660.1	1021	1927	1028	0.5298391281785159	MEF2B
3	idMA0052.3	1041	1974	1048	0.5273556231003039	MEF2A
4	idMA0497.1	1170	2411	1190	0.4852758191621734	MEF2C
5	idMA0465.1	125	262	131	0.4770992366412214	CDX2
6	idMA0108.2	571	1265	588	0.4513833992094862	TBP
7	idMA0033.2	235	538	360	0.4368029739776952	FOXL1
8	idMA0849.1	173	398	179	0.4346733668341709	FOXO6
9	idMA0042.2	200	482	311	0.4149377593360996	FOXI1
10	idMA0910.1	278	674	300	0.4124629080118694	Hoxd8
11	idMA0848.1	194	490	198	0.3959183673469388	FOXO4
12	idMA0847.1	284	728	396	0.3901098901098901	FOXD2
13	idMA0031.1	170	440	256	0.3863636363636364	FOXD1
14	idMA0602.1	104	271	136	0.3837638376383764	Arid5a
15	idMA0878.1	225	590	295	0.3813559322033898	CDX1
16	idMA0901.1	212	558	243	0.3799283154121864	HOXB13
17	idMA0650.1	177	474	235	0.3734177215189873	HOXA13
18	idMA0879.1	338	951	357	0.3554153522607781	Dlx1
19	idMA0072.1	158	450	162	0.3511111111111111	RORA(var.2)
20	idMA0851.1	124	357	131	0.3473389355742297	Foxj3
21	idMA0629.1	254	734	263	0.3460490463215259	Rhox11
22	idMA0485.1	193	585	209	0.3299145299145299	Hoxc9
23	idMA0845.1	144	438	156	0.3287671232876712	FOXB1
24	idMA0601.1	189	579	198	0.32642487046632124	Arid3b
25	idMA0635.1	188	581	382	0.32358003442340794	BARHL2
26	idMA0793.1	274	863	279	0.3174971031286211	POU6F2
27	idMA0467.1	675	2128	689	0.3171992481203008	Crx
28	idMA0904.1	189	599	199	0.315525876460768	Hoxb5
29	idMA0883.1	603	1912	625	0.3153765690376569	Dmbx1
30	idMA0125.1	320	1029	330	0.3109815354713314	Nobox
31	idMA0068.2	240	782	508	0.3069053708439898	PAX4
32	idMA0712.1	757	2477	828	0.30561162696810656	OTX2
33	idMA0708.1	189	621	262	0.3043478260869565	MSX2
34	idMA0893.1	240	792	356	0.30303030303030304	GSX2
35	idMA0854.1	144	477	175	0.3018867924528302	Alx1
36	idMA0722.1	253	839	326	0.30154946364719903	VAX1
37	idMA0711.1	747	2478	765	0.30145278450363194	OTX1
38	idMA0713.1	238	796	297	0.2989949748743719	PHOX2A
39	idMA0899.1	232	777	238	0.2985842985842986	HOXA10
40	idMA0036.2	217	727	232	0.2984869325997249	GATA2
41	idMA0850.1	213	714	252	0.29831932773109243	FOXP3
42	idMA0132.2	214	719	224	0.2976356050069541	PDX1
43	idMA0726.1	255	858	270	0.2972027972027972	VSX2
44	idMA0881.1	296	996	323	0.2971887550200803	Dlx4
45	idMA0709.1	229	771	324	0.29701686121919585	Msx3
46	idMA0714.1	664	2236	725	0.29695885509839004	PITX3
47	idMA0724.1	254	862	279	0.29466357308584684	VENTX
48	idMA0628.1	89	303	188	0.2937293729372937	POU6F1
49	idMA0718.1	205	702	273	0.29202279202279197	RAX
50	idMA0674.1	250	861	260	0.29036004645760743	NKX6-1
51	idMA0903.1	275	949	295	0.2897787144362487	HOXB3
52	idMA0884.1	348	1202	399	0.2895174708818636	DUXA
53	idMA0891.1	695	2401	824	0.2894627238650562	GSC2
54	idMA0521.1	400	1382	413	0.2894356005788712	Tcf12
55	idMA0887.1	311	1075	428	0.2893023255813953	EVX1
56	idMA0875.1	264	913	341	0.2891566265060241	BARX1
57	idMA0648.1	689	2387	771	0.2886468370339338	GSC
58	idMA0885.1	194	676	295	0.2869822485207101	Dlx2
59	idMA0892.1	275	960	420	0.2864583333333333	GSX1
60	idMA0716.1	247	863	357	0.2862108922363847	PRRX1
61	idMA0703.1	283	996	296	0.2841365461847389	LMX1B
62	idMA0630.1	192	676	374	0.2840236686390533	SHOX
63	idMA0720.1	238	840	342	0.2833333333333333	Shox2
64	idMA0717.1	262	927	380	0.2826321467098166	RAX2
65	idMA0618.1	229	815	233	0.2809815950920245	LBX1
66	idMA0886.1	211	753	270	0.2802124833997344	EMX2
67	idMA0725.1	267	953	284	0.2801678908709339	VSX1
68	idMA0766.1	418	1497	435	0.2792251169004676	GATA5
69	idMA0723.1	203	728	284	0.27884615384615385	VAX2
70	idMA0874.1	108	390	110	0.2769230769230769	Arx
71	idMA0721.1	197	713	384	0.2762973352033661	UNCX
72	idMA0704.1	268	975	293	0.2748717948717949	Lhx4
73	idMA0075.2	190	692	373	0.2745664739884393	Prrx2
74	idMA0882.1	265	966	290	0.2743271221532091	DLX6
75	idMA0719.1	586	2144	661	0.2733208955223881	RHOXF1
76	idMA0853.1	146	535	148	0.27289719626168224	Alx4
77	idMA0902.1	253	929	275	0.2723358449946179	HOXB2
78	idMA0877.1	187	687	358	0.27219796215429404	Barhl1
79	idMA0661.1	218	801	550	0.2721598002496879	MEOX1
80	idMA0681.1	262	965	264	0.27150259067357513	Phox2b
81	idMA0662.1	261	962	370	0.2713097713097713	MIXL1
82	idMA0682.1	719	2697	746	0.26659251019651464	Pitx1
83	idMA0702.1	228	858	259	0.2657342657342657	LMX1A
84	idMA0644.1	188	709	380	0.2651622002820874	ESX1
85	idMA0816.1	410	1547	475	0.2650290885585003	Ascl2
86	idMA0642.1	341	1290	382	0.26434108527131783	EN2
87	idMA0700.1	200	757	206	0.26420079260237783	LHX2
88	idMA0880.1	259	981	306	0.2640163098878695	Dlx3
89	idMA0889.1	244	926	252	0.2634989200863931	GBX1
90	idMA0900.1	244	928	371	0.2629310344827586	HOXA2
91	idMA0612.1	252	963	377	0.2616822429906542	EMX1
92	idMA0607.1	211	807	365	0.2614622057001239	Bhlha15
93	idMA0658.1	248	951	254	0.2607781282860147	LHX6
94	idMA0675.1	250	959	261	0.2606882168925965	NKX6-2
95	idMA0063.1	173	664	182	0.2605421686746988	Nkx2-5
96	idMA0706.1	250	964	349	0.25933609958506226	MEOX2
97	idMA0634.1	194	751	303	0.2583222370173103	ALX3
98	idMA0117.2	473	1834	590	0.2579062159214831	Mafb
99	idMA0888.1	357	1388	386	0.25720461095100866	EVX2
100	idMA0499.1	247	966	386	0.2556935817805383	Myod1
101	idMA0909.1	194	760	203	0.2552631578947369	HOXD13
102	idMA0705.1	270	1069	278	0.2525724976613657	Lhx8
103	idMA0699.1	164	658	292	0.2492401215805471	LBX2
104	idMA0654.1	157	644	166	0.2437888198757764	ISX
105	idMA0500.1	309	1278	320	0.24178403755868544	Myog
106	idMA0876.1	308	1286	318	0.23950233281493	BSX
107	idMA0707.1	120	684	122	0.17543859649122806	MNX1
108	idMA0842.1	370	2361	404	0.1567132570944515	NRL