Software Open Access

Phos2Net

Marion Buffard

Reconstruct a network associated to a list of target proteins (differentially phosphorylated) based on KEGG and Pathway Common databases.
This code is an improvement of the code from:
Naldi A, Larive RM, Czerwinska U, Urbach S, Montcourrier P, Roy C, et al. (2017) Reconstruction and signal propagation analysis of the Syk signaling network in breast cancer cells. PLoS Comput Biol 13(3): e1005432
http://dx.doi.org/10.1371/journal.pcbi.1005432
GUI and options have been added. It contains all databases needed.

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Publication date:
July 12, 2019
DOI:
10.5281/zenodo.3333687

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10.5281/zenodo.3333687

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Keyword(s):
Phosphoproteomic, Network, signaling path
License (for files):
Creative Commons Attribution 4.0 International

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Version 1 10.5281/zenodo.3333687 Jul 12, 2019
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