,FREQUENCY,GENE,LOCUS,LOG_FREQ,NON_EFFICACIOUS,PATIENT_ID,RESISTANCE,SNP_TYPE,TIME,TRANSITION,WT_CODON
0,0.0932,Rv0143c-Rv0144,170230,-2.3730075572905918,0,Patient01,DS,IGR,0,1,-
1,0.0577,Rv3095,3464199,-2.852498105468084,0,Patient01,DS,NSY,0,0,GAC
2,0.392,Rv3689,4131243,-0.9364934391916744,0,Patient01,DS,NSY,0,1,GGG
3,0.0152,Rv0143c-Rv0144,170230,-4.186459851129906,0,Patient01,DS,IGR,2,1,-
4,0.06509999999999999,Rv3095,3464199,-2.731830729767613,0,Patient01,DS,NSY,2,0,GAC
5,0.4745,Rv3689,4131243,-0.7454936609321544,0,Patient01,DS,NSY,2,1,GGG
6,0.0679,Rv0144,170621,-2.6897192444174864,0,Patient01,DS,NSY,2,1,GAG
7,0.0983,Rv0457c,548734,-2.3197312518290163,0,Patient01,DS,NSY,2,1,GCC
8,0.0176,Rv2582,2907406,-4.039856376938031,0,Patient01,DS,NSY,2,0,GAC
9,0.0161,Rv3124,3489824,-4.1289360069917205,0,Patient01,DS,NSY,2,0,GTG
10,0.1364,Rv3379c,3794322,-1.9921635335727756,0,Patient01,DS,SYN,2,1,TAT
11,0.0192,Rv3499c,3918847,-3.9528449999484017,0,Patient01,DS,SYN,2,0,CCA
12,0.29350000000000004,Rv0143c-Rv0144,170230,-1.2258776397139857,0,Patient01,DS,IGR,4,1,-
13,0.0732,Rv3095,3464199,-2.614559858014871,0,Patient01,DS,NSY,4,0,GAC
14,0.6462,Rv3689,4131243,-0.4366462255917392,0,Patient01,DS,NSY,4,1,GGG
15,0.046500000000000014,Rv1409,1585385,-3.0683029663888264,0,Patient01,DS,SYN,4,0,CGC
16,0.0153,Rv1825-Rv1826,2071922,-4.179902450583747,0,Patient01,DS,IGR,4,1,-
17,0.0227,Rv1974,2217683,-3.78539035449478,0,Patient01,DS,NSY,4,0,CAG
18,0.0848,Rv0143c-Rv0144,170230,-2.46745973618428,0,Patient01,DS,IGR,6,1,-
19,0.0979,Rv3095,3464199,-2.3238087294456724,0,Patient01,DS,NSY,6,0,GAC
20,0.7054,Rv3689,4131243,-0.3489902611801854,0,Patient01,DS,NSY,6,1,GGG
21,0.0617,CFBS_2204-CFBS_2205,2338108,-2.785471348070795,0,Patient01,DS,IGR,6,0,-
22,0.0321,Rv0115-Rv0116c,140242,-3.438899248846167,0,Patient02,DS,IGR,0,1,-
23,0.0497,Rv0552,644429,-3.0017503458795542,0,Patient02,DS,NSY,0,1,GAG
24,0.0087,Rv0657c,753589,-4.744432253321599,0,Patient02,DS,NSY,0,0,GAC
25,0.0315,Rv0846c,944158,-3.4577677331505496,0,Patient02,DS,NSY,0,1,AAG
26,0.0231,Rv1165,1294523,-3.7679226614543886,0,Patient02,DS,NSY,0,1,GCG
27,0.07440000000000001,Rv1181,1317444,-2.5982993371430907,0,Patient02,DS,SYN,0,1,AGC
28,0.0161,Rv1481,1671979,-4.1289360069917205,0,Patient02,DS,SYN,0,1,CCG
29,0.2047,CFBS_3519,3704434,-1.5862097863148932,0,Patient02,DS,NSY,0,1,CGC
30,0.1506,Rv3596c,4040535,-1.893127963616344,0,Patient02,DS,NSY,0,1,GAA
31,0.0131,Rv3823c,4290715,-4.335143048775032,0,Patient02,DS,NSY,0,1,AGC
32,0.0277,Rv0657c,753589,-3.5863228657888437,0,Patient02,DS,NSY,2,0,GAC
33,0.0053,CFBS_3519,3704434,-5.240048458424061,0,Patient02,DS,NSY,2,1,CGC
34,0.0522,Rv3596c,4040535,-2.952672784093544,0,Patient02,DS,NSY,2,1,GAA
35,0.0062,Rv3823c,4290715,-5.083205986931091,0,Patient02,DS,NSY,2,1,AGC
36,0.0206,Rv0514,606268,-3.8824642031866015,0,Patient02,DS,SYN,2,1,GGC
37,0.0297,Rv0570,661504,-3.516608233173483,0,Patient02,DS,SYN,2,0,GCC
38,0.0287,Rv0658c,753747,-3.5508581562165618,0,Patient02,DS,SYN,2,1,CTA
39,0.0254,Rv1133c-Rv1134,1261842,-3.6730061049576466,0,Patient02,DS,IGR,2,1,-
40,0.215,Rv1512,1704548,-1.5371172508544744,0,Patient02,DS,SYN,2,1,GCC
41,0.0268,Rv1783,2020810,-3.6193533914653258,0,Patient02,DS,SYN,2,1,CTC
42,0.0154,Rv2071c,2328280,-4.173387769562553,0,Patient02,DS,NSY,2,1,GAG
43,0.0212,Rv2205c,2470131,-3.8537540973041695,0,Patient02,DS,NSY,2,0,CAC
44,0.2767,Rv2404c,2702109,-1.2848213921892568,0,Patient02,DS,SYN,2,0,ACC
45,0.2665,Rv2973c,3328524,-1.322381035376238,0,Patient02,DS,NSY,2,0,TCT
46,0.0214,Rv3786c,4232644,-3.8443643569543307,0,Patient02,DS,SYN,2,0,GTT
47,0.0179,Rv3908,4393505,-4.022954566135428,0,Patient02,DS,SYN,2,1,CGG
48,0.32030000000000003,Rv3823c,4290715,-1.1384972223670244,0,Patient02,DS,NSY,4,1,AGC
49,0.1574,Rv0777,871118,-1.8489649429988344,0,Patient02,DS,NSY,4,1,ACT
50,0.5135000000000001,Rv0963c,1075718,-0.666505249613524,0,Patient02,DS,NSY,4,1,CCG
51,0.0783,Rv0987,1104693,-2.54720767598538,0,Patient02,DS,NSY,4,1,ATA
52,0.1394,Rv1190,1333460,-1.9704077806557136,0,Patient02,DS,NSY,4,1,CCC
55,0.5517,Rv2710,3023049,-0.5947508587037521,0,Patient02,DS,NSY,4,1,GAA
56,1.0,Rv2205c,2470131,0.0,0,Patient02,DS,NSY,6,0,CAC
57,0.993,Rv3786c,4232644,-0.007024614936964465,0,Patient02,DS,SYN,6,0,GTT
58,0.0167,Rv0490-Rv0491,580799,-4.092346559559427,0,Patient06,Hr,IGR,0,1,-
59,0.1175,Rv1552,1758156,-2.1413169453979237,0,Patient06,Hr,NSY,0,1,ACG
60,0.0268,Rv1682,1906650,-3.6193533914653258,0,Patient06,Hr,NSY,0,0,AAG
61,0.0212,Rv1777,2011715,-3.8537540973041695,0,Patient06,Hr,NSY,0,0,CGC
62,0.5338,Rv0124-Rv0125,150999,-0.6277340420117132,0,Patient06,Hr,IGR,2,1,-
63,0.8343,Rv0124-Rv0125,150999,-0.18116222907410812,0,Patient06,Hr,IGR,4,1,-
64,0.042,Rv0171,201197,-3.1700856606987684,0,Patient06,Hr,NSY,4,0,ATC
65,0.1186,Rv1256c,1404092,-2.131998792418512,0,Patient06,Hr,NSY,4,0,CAG
66,0.0339,Rv1626,1828406,-3.3843402645957323,0,Patient06,Hr,NSY,4,1,GCC
67,0.0265,Rv1792,2030604,-3.6306105459899607,0,Patient06,Hr,SYN,4,1,GAA
68,0.1909,Rv2187,2448252,-1.6560055482504352,0,Patient06,Hr,SYN,4,1,GAC
69,0.4436,Rv0124-Rv0125,150999,-0.8128320235059251,0,Patient06,Hr,IGR,6,1,-
70,0.3616,Rv0567-Rv0568,659439,-1.0172166504641156,0,Patient06,Hr,IGR,6,0,-
71,0.3670000000000001,Rv1823,2070074,-1.0023934309275666,0,Patient06,Hr,NSY,6,1,CTC
72,0.3098,Rv1863c,2111339,-1.1718283509993688,0,Patient06,Hr,NSY,6,0,TGC
73,0.9987,Rv0124-Rv0125,150999,-0.0013008457330480696,0,Patient06,Hr,IGR,8,1,-
74,0.0552,Rv0175,206908,-2.8967923256990877,0,Patient06,Hr,NSY,8,0,GAG
75,0.0329,Rv0175,206909,-3.4142826212108113,0,Patient06,Hr,NSY,8,0,GAG
76,0.016,Rv0823c,916691,-4.135166556742356,0,Patient06,Hr,NSY,8,1,GCG
77,0.052300000000000006,Rv0861c-Rv0862c,960271,-2.9507589079112595,0,Patient06,Hr,IGR,8,0,-
78,0.0486,CFBS_1773-CFBS_1774,1901687,-3.024131748075689,0,Patient06,Hr,IGR,8,0,-
79,0.0155,Rv1478,1668949,-4.166915255056936,0,Patient07,Hr,SYN,0,1,GCC
80,0.6197,Rv2280,2551722,-0.4785197890140752,0,Patient07,Hr,SYN,0,1,CTG
81,0.0318,Rv2391,2685164,-3.4482889891960062,0,Patient07,Hr,SYN,0,0,GGA
82,0.0665,Rv3506,3925848,-2.7105533313203285,0,Patient07,Hr,NSY,0,1,GGA
83,0.0699,Rv1478,1668949,-2.660689629742373,0,Patient07,Hr,SYN,2,1,GCC
84,0.8051,Rv2280,2551722,-0.21678878567620194,0,Patient07,Hr,SYN,2,1,CTG
85,0.0415,Rv0320,388138,-3.1820618517454844,0,Patient07,Hr,NSY,2,0,GCT
86,0.0228,Rv1319c,1480945,-3.7809947430217417,0,Patient07,Hr,SYN,2,0,ACG
87,0.0212,Rv1319c,1480948,-3.8537540973041695,0,Patient07,Hr,SYN,2,1,GAG
88,0.019,Rv1319c,1480972,-3.963316299815697,0,Patient07,Hr,SYN,2,1,GAA
90,0.1286,CFBS_2204-CFBS_2205,2338108,-2.051048467178618,0,Patient07,Hr,IGR,2,0,-
91,0.0274,Rv2223c,2495104,-3.5972122655881127,0,Patient07,Hr,NSY,2,0,GCG
92,0.0232,Rv2724c,3036585,-3.7636030003098733,0,Patient07,Hr,NSY,2,1,GGG
93,0.08449999999999999,Rv2724c-Rv2725c,3037362,-2.471003744619009,0,Patient07,Hr,IGR,2,0,-
94,0.0447,Rv2939,3275142,-3.1077817773626135,0,Patient07,Hr,NSY,2,1,TGG
95,0.0197,CFBS_3727-CFBS_3728,3945254,-3.927136643238194,0,Patient07,Hr,IGR,2,1,-
96,0.0181,Rv1478,1668949,-4.011843340710357,0,Patient07,Hr,SYN,4,1,GCC
97,0.6773,Rv2280,2551722,-0.3896409727612791,0,Patient07,Hr,SYN,4,1,CTG
98,0.0392,Rv0191,222526,-3.23907853218572,0,Patient07,Hr,NSY,4,1,ACC
99,0.041100000000000005,Rv2946c,3291908,-3.1917471574799485,0,Patient07,Hr,SYN,4,0,CCA
100,0.0277,Rv3447c,3864945,-3.5863228657888437,0,Patient07,Hr,SYN,4,1,CTG
101,0.036000000000000004,Rv3491,3909985,-3.324236340526027,0,Patient07,Hr,SYN,4,1,CTC
102,0.0363,CFBS_3727-CFBS_3728,3945236,-3.315937537711332,0,Patient07,Hr,IGR,4,0,-
103,0.0295,CFBS_3727-CFBS_3728,3945237,-3.523365015636363,0,Patient07,Hr,IGR,4,0,-
104,0.0401,CFBS_3727-CFBS_3728,3945240,-3.216378944669614,0,Patient07,Hr,IGR,4,0,-
105,0.134,CFBS_3727-CFBS_3728,3945244,-2.0099154790312257,0,Patient07,Hr,IGR,4,0,-
106,0.0271,Rv3691,4133472,-3.6082215510964817,0,Patient07,Hr,NSY,4,0,CTT
107,0.0178,Rv3708c,4152147,-4.028556821684099,0,Patient07,Hr,NSY,4,1,GAG
108,1.0,Rv2280,2551722,0.0,0,Patient07,Hr,SYN,6,1,CTG
109,0.0191,Rv0467,557847,-3.958066943929553,0,Patient07,Hr,SYN,6,0,CCC
110,0.0188,Rv0772,864785,-3.9738984091462335,0,Patient07,Hr,NSY,6,0,GTG
111,0.0156,Rv1315,1470815,-4.1604843647266465,0,Patient07,Hr,SYN,6,1,GGA
112,0.0257,Rv1459c,1644845,-3.6612642870809626,0,Patient07,Hr,NSY,6,0,ACC
113,0.0175,Rv2169c,2431609,-4.045554398052668,0,Patient07,Hr,NSY,6,0,ACC
114,0.0232,Rv2470,2773281,-3.7636030003098733,0,Patient07,Hr,NSY,6,0,GTG
115,0.0156,Rv2794c,3103340,-4.1604843647266465,0,Patient07,Hr,NSY,6,0,ACC
116,0.0174,Rv3778c-Rv3779,4224962,-4.051285072761654,0,Patient07,Hr,IGR,6,0,-
117,0.7574,Rv2280,2551722,-0.27786376351444264,0,Patient07,Hr,SYN,8,1,CTG
118,0.0415,Rv0405,489304,-3.1820618517454844,0,Patient07,Hr,NSY,8,1,CAT
119,0.0362,Rv1533,1734067,-3.318696160150412,0,Patient07,Hr,NSY,8,0,CCG
120,0.06,Rv3644c,4082191,-2.8134107167600364,0,Patient07,Hr,SYN,8,1,GTC
121,0.0156,Rv0927c,1034054,-4.1604843647266465,1,Patient11,MDR,NSY,0,0,CTG
122,0.0891,Rv0970,1081122,-2.4179959445053734,1,Patient11,MDR,NSY,0,0,CTG
123,0.88,Rv1129c,1253375,-0.12783337150988489,1,Patient11,MDR,NSY,0,1,GAC
124,0.7634000000000001,Rv1197,1340667,-0.2699731386710076,1,Patient11,MDR,SYN,0,1,TCA
125,0.8534999999999999,Rv1354c,1520603,-0.15840973674764186,1,Patient11,MDR,NSY,0,1,CTG
126,0.0848,Rv1815-Rv1816,2058210,-2.46745973618428,1,Patient11,MDR,IGR,0,0,-
127,0.08689999999999999,Rv1862,2109985,-2.442997246710791,1,Patient11,MDR,NSY,0,1,GCG
128,0.0632,Rv2059,2315978,-2.761450977829325,1,Patient11,MDR,NSY,0,1,GCG
129,0.0509,Rv2544,2867612,-2.97789235542566,1,Patient11,MDR,SYN,0,1,AAA
130,0.044500000000000005,Rv3244c,3624492,-3.1122660898099426,1,Patient11,MDR,NSY,0,1,ACG
131,0.0958,Rv3439c,3858673,-2.3454925940053224,1,Patient11,MDR,SYN,0,0,GCC
132,0.0665,Rv3883c,4364594,-2.7105533313203285,1,Patient11,MDR,NSY,0,1,CTG
133,0.0095,Rv0970,1081122,-4.656463480375642,1,Patient11,MDR,NSY,2,0,CTG
134,0.8704000000000001,Rv1129c,1253375,-0.1388024028804588,1,Patient11,MDR,NSY,2,1,GAC
135,0.6858,Rv1197,1340667,-0.3771692389533171,1,Patient11,MDR,SYN,2,1,TCA
136,0.8795000000000001,Rv1354c,1520603,-0.12840171480452411,1,Patient11,MDR,NSY,2,1,CTG
137,0.0155,Rv3244c,3624492,-4.166915255056936,1,Patient11,MDR,NSY,2,1,ACG
138,0.0291,Rv0002,2752,-3.5370171048046903,1,Patient11,MDR,NSY,2,0,GTG
139,0.0154,Rv0730,822934,-4.173387769562553,1,Patient11,MDR,SYN,2,1,GCC
140,0.0205,Rv0731c,823950,-3.887330392837775,1,Patient11,MDR,NSY,2,0,GAA
141,0.0251,Rv0980c-Rv0981,1096633,-3.6848874328443992,1,Patient11,MDR,IGR,2,0,-
142,0.0087,MTB000064,1471660,-4.744432253321599,1,Patient11,MDR,-,2,0,-
143,0.0264,Rv1382,1555595,-3.6343912688298663,1,Patient11,MDR,NSY,2,1,GAG
144,0.0249,Rv1507c,1697413,-3.6928874755114753,1,Patient11,MDR,NSY,2,0,GTC
145,0.0197,Rv1525,1720069,-3.927136643238194,1,Patient11,MDR,NSY,2,0,CAC
146,0.013,Rv1682,1906806,-4.3428059215206005,1,Patient11,MDR,NSY,2,0,CAG
147,0.0171,Rv2012-Rv2013,2259873,-4.068676815473522,1,Patient11,MDR,IGR,2,0,-
148,0.0363,Rv2384,2677194,-3.315937537711332,1,Patient11,MDR,NSY,2,1,CGC
149,0.0449,Rv3331,3717700,-3.103317484233928,1,Patient11,MDR,NSY,2,1,CAC
150,0.1807,Rv3470c,3887628,-1.7109170813839545,1,Patient11,MDR,NSY,2,0,GTG
151,0.017,Rv3502c,3921759,-4.0745419349259215,1,Patient11,MDR,SYN,2,1,GCC
152,0.0356,Rv3795,4248018,-3.3354096411241523,1,Patient11,MDR,NSY,2,1,GTG
153,0.0161,Rv3820c,4284913,-4.1289360069917205,1,Patient11,MDR,NSY,2,0,GTA
154,0.8745999999999999,Rv1129c,1253375,-0.1339886400033169,1,Patient11,MDR,NSY,4,1,GAC
155,0.8852,Rv1354c,1520603,-0.12194167080524247,1,Patient11,MDR,NSY,4,1,CTG
156,0.0268,Rv0730,822934,-3.6193533914653258,1,Patient11,MDR,SYN,4,1,GCC
157,0.0076,Rv1507c,1697413,-4.879607031689852,1,Patient11,MDR,NSY,4,0,GTC
158,0.0462,Rv1682,1906806,-3.074775480894444,1,Patient11,MDR,NSY,4,0,CAG
159,0.30820000000000003,Rv3470c,3887628,-1.1770063560961217,1,Patient11,MDR,NSY,4,0,GTG
160,0.008199999999999999,Rv3502c,3921759,-4.803621124711929,1,Patient11,MDR,SYN,4,1,GCC
161,0.0152,Rv3795,4248018,-4.186459851129906,1,Patient11,MDR,NSY,4,1,GTG
162,0.0368,Rv0117,141999,-3.302257433807252,1,Patient11,MDR,NSY,4,1,CCG
163,0.0253,Rv0663,757143,-3.6769508832486624,1,Patient11,MDR,NSY,4,0,CTC
164,0.0984,Rv0816c,910003,-2.318714474923929,1,Patient11,MDR,NSY,4,1,ACA
165,0.0377,Rv0880,979167,-3.278095184528172,1,Patient11,MDR,SYN,4,1,GTA
166,0.0335,Rv2177c-Rv2178c,2440299,-3.396209840151116,1,Patient11,MDR,IGR,4,1,-
167,0.0362,Rv2296,2568308,-3.318696160150412,1,Patient11,MDR,NSY,4,1,GGT
168,0.0054,Rv2308-MTB000028,2581390,-5.221356325411908,1,Patient11,MDR,IGR,4,1,-
169,0.0335,Rv2339,2617077,-3.396209840151116,1,Patient11,MDR,SYN,4,1,TCA
170,0.0139,Rv2405-Rv2406c,2703972,-4.275866438845491,1,Patient11,MDR,IGR,4,1,-
171,0.0191,Rv2874,3185022,-3.958066943929553,1,Patient11,MDR,NSY,4,0,CGA
172,0.0152,Rv2931,3245482,-4.186459851129906,1,Patient11,MDR,NSY,4,0,CAC
173,0.0154,Rv2932,3253539,-4.173387769562553,1,Patient11,MDR,NSY,4,1,CAC
174,0.028,Rv3190c,3556651,-3.575550768806933,1,Patient11,MDR,NSY,4,1,AAC
175,0.0388,Rv3270,3651392,-3.2493350323529087,1,Patient11,MDR,SYN,4,1,GTG
176,0.0298,Rv3802c,4263798,-3.513246885470778,1,Patient11,MDR,NSY,4,1,AAC
177,0.0371,Rv3810-Rv3811,4274704,-3.294138309368748,1,Patient11,MDR,IGR,4,0,-
178,0.0194,Rv3864,4341296,-3.9424822129128554,1,Patient11,MDR,NSY,4,1,GCC
179,0.6722,Rv1129c,1253375,-0.3971993636911317,1,Patient11,MDR,NSY,6,1,GAC
180,0.6729999999999999,Rv1354c,1520603,-0.39600994933740935,1,Patient11,MDR,NSY,6,1,CTG
181,0.16079999999999994,MTB000064,1471660,-1.8275939222372712,1,Patient11,MDR,-,6,0,-
182,0.2059,Rv1507c,1697413,-1.5803646649483931,1,Patient11,MDR,NSY,6,0,GTC
183,0.3038,Rv3470c,3887628,-1.1913856888204646,1,Patient11,MDR,NSY,6,0,GTG
184,0.2,Rv3795,4248018,-1.6094379124341005,1,Patient11,MDR,NSY,6,1,GTG
185,0.1978,Rv2308-MTB000028,2581390,-1.6204988597935253,1,Patient11,MDR,IGR,6,1,-
186,0.0181,Rv2405-Rv2406c,2703972,-4.011843340710357,1,Patient11,MDR,IGR,6,1,-
187,0.841,Rv0261c-Rv0262c,314299,-0.17316361900918906,1,Patient11,MDR,IGR,6,0,-
188,0.0591,Rv0402c,480604,-2.8285243545700847,1,Patient11,MDR,NSY,6,0,TTT
189,0.6629999999999999,Rv0749,841494,-0.4109802887962747,1,Patient11,MDR,SYN,6,0,CTC
190,0.6616,Rv0749,841495,-0.4130941352726555,1,Patient11,MDR,NSY,6,1,ATG
191,0.6846,MTB000064,1471656,-0.37892055288605214,1,Patient11,MDR,-,6,1,-
192,0.0625,Rv1329c,1498580,-2.772588722239781,1,Patient11,MDR,NSY,6,0,TGC
193,0.0215,Rv1469,1658473,-3.83970234384852,1,Patient11,MDR,NSY,6,0,TGG
194,0.8602,Rv1530,1731853,-0.15059035863250114,1,Patient11,MDR,NSY,6,0,TTG
195,0.858,Rv2043c-Rv2044c,2289252,-0.15315117949417478,1,Patient11,MDR,IGR,6,1,-
196,0.1968,Rv2267c,2541984,-1.625567294363984,1,Patient11,MDR,NSY,6,0,GTC
197,0.8462000000000001,Rv2427A-Rv2428,2726119,-0.16699954069616987,1,Patient11,MDR,IGR,6,0,-
198,0.8637999999999999,Rv2897c,3206526,-0.14641401845553642,1,Patient11,MDR,NSY,6,0,GCC
199,0.0159,Rv2921c,3233568,-4.141436169755951,1,Patient11,MDR,NSY,6,0,GAG
200,0.3091,Rv3233c,3610174,-1.1740904298440664,1,Patient11,MDR,SYN,6,1,CGG
201,0.8662000000000001,Rv3260c-Rv3261,3640256,-0.14363945020161067,1,Patient11,MDR,IGR,6,0,-
202,0.8529000000000001,Rv3587c-Rv3588c,4029854,-0.15911297165707314,1,Patient11,MDR,IGR,6,0,-
203,0.6607999999999999,Rv1197,1340667,-0.4143040567753689,1,Patient11,MDR,SYN,8,1,TCA
204,0.731,Rv1563c,1767490,-0.3133418192323586,1,Patient11,MDR,NSY,8,0,ACC
207,0.2644,Rv3084,3450916,-1.3302921710046058,1,Patient11,MDR,NSY,8,0,GTC
208,0.0774,Rv0425c,515114,-2.5587684983864563,0,Patient03,DS,NSY,2,1,GGC
209,0.0266,Rv0686,786793,-3.626844063194484,0,Patient03,DS,SYN,2,0,CGG
210,0.0776,Rv1310,1465867,-2.5561878517929637,0,Patient03,DS,NSY,2,0,GAC
211,0.5619,Rv1486c,1676697,-0.5764313808639846,0,Patient03,DS,NSY,2,1,TCG
212,0.0232,Rv1664,1890637,-3.7636030003098733,0,Patient03,DS,NSY,2,1,TGC
213,0.0737,Rv2182c,2445066,-2.6077524797868463,0,Patient03,DS,SYN,2,1,CCC
214,0.0718,Rv2281,2553232,-2.6338708029279587,0,Patient03,DS,NSY,2,0,GAT
215,0.049100000000000005,Rv3207c,3584293,-3.0138962441816624,0,Patient03,DS,SYN,2,1,GGT
216,0.0563,Rv3479,3898094,-2.877060743836493,0,Patient03,DS,NSY,2,1,CCA
217,0.0052,Rv3619c,4060230,-5.259096653394756,0,Patient03,DS,SYN,2,1,CAC
218,0.3625,Rv3619c,4060230,-1.0147308046874075,0,Patient03,DS,SYN,6,1,CAC
219,0.7071,Rv0332,397852,-0.346583180371942,0,Patient03,DS,SYN,6,0,GCC
220,0.0187,Rv1015c,1133976,-3.9792317551215963,0,Patient03,DS,NSY,6,0,GCC
223,0.12619999999999998,Rv0118c,142158,-2.0698873288750246,0,Patient04,DS,SYN,0,0,GCA
224,0.0272,Rv0226c,270691,-3.6045383056801854,0,Patient04,DS,NSY,0,1,GTG
225,0.1985,Rv0248c,300354,-1.616966178854892,0,Patient04,DS,SYN,0,0,TCG
226,0.0481,Rv0473,563649,-3.0344731018704216,0,Patient04,DS,NSY,0,1,CGC
227,0.0639,Rv0505c,595629,-2.750435917598648,0,Patient04,DS,SYN,0,1,ATC
228,0.0333,Rv0524,615211,-3.402197881995739,0,Patient04,DS,NSY,0,0,GTG
229,0.016,Rv0784,879305,-4.135166556742356,0,Patient04,DS,NSY,0,1,GCG
230,0.0153,Rv1004c,1121759,-4.179902450583747,0,Patient04,DS,SYN,0,0,CCA
231,0.0652,Rv1165,1295658,-2.7302958100495296,0,Patient04,DS,SYN,0,1,GCG
232,0.06480000000000001,Rv1522c,1716868,-2.736449675623908,0,Patient04,DS,NSY,0,1,GCC
233,0.108,Rv1716,1944162,-2.2256240518579173,0,Patient04,DS,NSY,0,1,GCG
234,0.0717,Rv1875-Rv1876,2124962,-2.6352645313765626,0,Patient04,DS,IGR,0,0,-
235,0.034,Rv2428,2726338,-3.381394754365976,0,Patient04,DS,NSY,0,0,GTG
236,0.024,Rv2455c,2755664,-3.729701448634192,0,Patient04,DS,SYN,0,1,ACC
237,0.0416,Rv2920c,3232159,-3.1796551117149194,0,Patient04,DS,SYN,0,0,ACC
238,0.0227,Rv2932,3251483,-3.78539035449478,0,Patient04,DS,NSY,0,1,GGC
239,0.1313,Rv3871,4348872,-2.0302704976733867,0,Patient04,DS,NSY,0,0,GAC
241,0.2396,Rv2764c,3073833,-1.428784412740843,0,Patient04,DS,SYN,4,1,GTC
242,0.3659000000000001,Rv3161c,3530928,-1.0053952069569758,0,Patient04,DS,NSY,4,1,GTG
243,0.0407,Rv0001,1206,-3.201527186533588,1,Patient12,MDR,SYN,0,1,CTG
244,0.0328,Rv0198c,235823,-3.4173267635920386,1,Patient12,MDR,NSY,0,1,CGC
245,0.0366,Rv0678,779193,-3.3077070385748164,1,Patient12,MDR,NSY,0,0,AGC
246,0.0076,Rv0678,779296,-4.879607031689852,1,Patient12,MDR,NSY,0,1,GGC
247,0.0173,Rv1065,1187603,-4.057048777478403,1,Patient12,MDR,NSY,0,1,TAC
248,0.0052,Rv1097c,1225354,-5.259096653394756,1,Patient12,MDR,NSY,0,0,ACC
249,0.0291,Rv1371,1543917,-3.5370171048046903,1,Patient12,MDR,SYN,0,1,CTG
250,0.0267,Rv1497,1688966,-3.623091713575933,1,Patient12,MDR,NSY,0,0,CAC
251,0.0141,Rv2130c,2391568,-4.261580481598013,1,Patient12,MDR,NSY,0,1,AAC
252,0.0309,Rv2634c-Rv2635,2962443,-3.4769990950784373,1,Patient12,MDR,IGR,0,0,-
253,0.0336,Rv2914c,3222366,-3.3932292120129786,1,Patient12,MDR,NSY,0,1,AGT
254,0.0178,Rv2935,3271395,-4.028556821684099,1,Patient12,MDR,NSY,0,0,GCG
255,0.0501,Rv2990c-Rv2991,3347797,-2.993734270891318,1,Patient12,MDR,IGR,0,1,-
256,0.4114,Rv3195,3564850,-0.8881893017632803,1,Patient12,MDR,NSY,0,1,ATC
257,0.0161,Rv3221c-Rv3221A,3597972,-4.1289360069917205,1,Patient12,MDR,IGR,0,1,-
258,0.0903,Rv3303c,3689763,-2.4046178185591973,1,Patient12,MDR,SYN,0,1,GCC
259,0.0166,Rv3696c,4138284,-4.098352583619639,1,Patient12,MDR,NSY,0,0,TGG
260,0.0208,Rv3696c,4138378,-3.8728022922748657,1,Patient12,MDR,NSY,0,0,GTG
261,0.0258,Rv3696c,4138591,-3.657380787054565,1,Patient12,MDR,NSY,0,0,ACC
262,0.0321,Rv3696c,4138960,-3.438899248846167,1,Patient12,MDR,NSY,0,1,ATG
263,0.02,Rv3696c,4139490,-3.912023005428147,1,Patient12,MDR,NSY,0,0,GGG
264,0.005600000000000001,Rv0001,1206,-5.184988681241033,1,Patient12,MDR,SYN,2,1,CTG
265,0.033,Rv0198c,235823,-3.4112477175156566,1,Patient12,MDR,NSY,2,1,CGC
266,0.0572,Rv0678,779193,-2.861201380596385,1,Patient12,MDR,NSY,2,0,AGC
267,0.0165,Rv0678,779296,-4.104394898075602,1,Patient12,MDR,NSY,2,1,GGC
268,0.0173,Rv1097c,1225354,-4.057048777478403,1,Patient12,MDR,NSY,2,0,ACC
269,0.046500000000000014,Rv1371,1543917,-3.0683029663888264,1,Patient12,MDR,SYN,2,1,CTG
270,0.01,Rv2130c,2391568,-4.605170185988091,1,Patient12,MDR,NSY,2,1,AAC
271,0.333,Rv3195,3564850,-1.0996127890016931,1,Patient12,MDR,NSY,2,1,ATC
272,0.0155,Rv3303c,3689763,-4.166915255056936,1,Patient12,MDR,SYN,2,1,GCC
273,0.0333,Rv0678,779215,-3.402197881995739,1,Patient12,MDR,NSY,2,0,CAA
274,0.0244,Rv1779c-Rv1780,2014677,-3.7131721466829815,1,Patient12,MDR,IGR,2,0,-
275,0.037000000000000005,Rv2792c-Rv2793c,3102347,-3.2968373663379125,1,Patient12,MDR,IGR,2,0,-
276,0.0156,Rv3303c,3689529,-4.1604843647266465,1,Patient12,MDR,SYN,2,1,CTG
277,0.0223,MTB000058,4099399,-3.8031686005160643,1,Patient12,MDR,-,2,0,-
278,0.0155,Rv0198c,235823,-4.166915255056936,1,Patient12,MDR,NSY,4,1,CGC
279,0.0195,Rv0678,779193,-3.9373408134124364,1,Patient12,MDR,NSY,4,0,AGC
280,0.0125,Rv1097c,1225354,-4.382026634673881,1,Patient12,MDR,NSY,4,0,ACC
281,0.0381,Rv1371,1543917,-3.267540996849481,1,Patient12,MDR,SYN,4,1,CTG
282,0.4456,Rv3195,3564850,-0.8083335903690628,1,Patient12,MDR,NSY,4,1,ATC
283,0.0347,Rv3303c,3689763,-3.3610155920293234,1,Patient12,MDR,SYN,4,1,GCC
284,0.011200000000000002,Rv0678,779215,-4.491841500681088,1,Patient12,MDR,NSY,4,0,CAA
285,0.0216,Rv3303c,3689529,-3.835061964292018,1,Patient12,MDR,SYN,4,1,CTG
286,0.0153,Rv0097,107444,-4.179902450583747,1,Patient12,MDR,SYN,4,0,TCG
287,0.0158,Rv0227c,271628,-4.147745338949217,1,Patient12,MDR,SYN,4,1,CCG
288,0.022,Rv2272,2545883,-3.816712825623821,1,Patient12,MDR,NSY,4,0,GAA
289,0.0219,Rv0678,779193,-3.8212686421596818,1,Patient12,MDR,NSY,6,0,AGC
290,0.0196,Rv0678,779296,-3.9322257127456655,1,Patient12,MDR,NSY,6,1,GGC
291,0.0203,Rv1097c,1225354,-3.897134392934396,1,Patient12,MDR,NSY,6,0,ACC
292,0.0449,Rv1371,1543917,-3.103317484233928,1,Patient12,MDR,SYN,6,1,CTG
293,0.2318,Rv2130c,2391568,-1.4618803480764857,1,Patient12,MDR,NSY,6,1,AAC
294,0.3342,Rv3195,3564850,-1.0960156628208435,1,Patient12,MDR,NSY,6,1,ATC
295,0.0925,Rv3303c,3689763,-2.3805466344637574,1,Patient12,MDR,SYN,6,1,GCC
296,0.0139,Rv0678,779215,-4.275866438845491,1,Patient12,MDR,NSY,6,0,CAA
297,0.2795,Rv3303c,3689529,-1.274752986386983,1,Patient12,MDR,SYN,6,1,CTG
298,0.0235,Rv0630c,722252,-3.7507548578320242,1,Patient12,MDR,NSY,6,1,GGC
299,0.0084,Rv0820,913145,-4.779523573132869,1,Patient12,MDR,SYN,6,1,GAT
300,0.0266,Rv1125,1248921,-3.626844063194484,1,Patient12,MDR,SYN,6,1,TAC
301,0.029,Rv2674,2990823,-3.540459448995663,1,Patient12,MDR,NSY,6,1,GAC
302,0.0159,Rv2916c,3226174,-4.141436169755951,1,Patient12,MDR,SYN,6,1,CTG
303,0.9375,Rv3303c-Rv3304,3690947,-0.06453852113757118,1,Patient12,MDR,IGR,6,1,-
304,0.0138,CFBS_3494-CFBS_3495,3683602,-4.2830866868189785,1,Patient12,MDR,IGR,6,0,-
305,0.0181,CFBS_3494-CFBS_3495,3683604,-4.011843340710357,1,Patient12,MDR,IGR,6,0,-
306,0.0575,CFBS_3494-CFBS_3495,3683631,-2.855970331178832,1,Patient12,MDR,IGR,6,0,-
307,0.0149,Rv0678,779193,-4.206394066030724,1,Patient12,MDR,NSY,8,0,AGC
308,0.0131,Rv0678,779296,-4.335143048775032,1,Patient12,MDR,NSY,8,1,GGC
309,0.0239,Rv1097c,1225354,-3.7338768200446717,1,Patient12,MDR,NSY,8,0,ACC
310,0.0278,Rv1371,1543917,-3.5827192582855463,1,Patient12,MDR,SYN,8,1,CTG
311,0.0071,Rv2130c,2391568,-4.947660494934867,1,Patient12,MDR,NSY,8,1,AAC
312,0.3959,Rv3195,3564850,-0.926593624870052,1,Patient12,MDR,NSY,8,1,ATC
313,0.0641,Rv3303c,3689763,-2.7473109150555133,1,Patient12,MDR,SYN,8,1,GCC
314,0.0225,Rv0678,779215,-3.7942399697717626,1,Patient12,MDR,NSY,8,0,CAA
315,0.0169,Rv3303c,3689529,-4.080441657053109,1,Patient12,MDR,SYN,8,1,CTG
316,0.0263,Rv0820,913145,-3.6381863397984175,1,Patient12,MDR,SYN,8,1,GAT
317,0.9441,Rv3303c-Rv3304,3690947,-0.05752318624366624,1,Patient12,MDR,IGR,8,1,-
318,0.0169,CFBS_3494-CFBS_3495,3683602,-4.080441657053109,1,Patient12,MDR,IGR,8,0,-
319,0.0539,CFBS_3494-CFBS_3495,3683631,-2.9206248010671856,1,Patient12,MDR,IGR,8,0,-
320,0.0181,Rv1376,1550310,-4.011843340710357,1,Patient12,MDR,NSY,8,0,AAG
321,0.0058,Rv1938,2191793,-5.149897361429764,1,Patient12,MDR,NSY,8,1,TAC
322,0.0168,Rv3225c,3601098,-4.086376392572924,1,Patient12,MDR,NSY,8,0,AAC
339,0.1611,CFBS_0040-CFBS_0041,40361,-1.8257299887992084,0,Patient05,DS,IGR,0,1,-
340,0.17420000000000002,Rv1636,1842627,-1.7475512145637344,0,Patient05,DS,SYN,0,1,AAG
341,0.0189,CFBS_2141,2265528,-3.96859335691654,0,Patient05,DS,NSY,0,1,GTG
342,0.1839,Rv2510c,2827042,-1.6933631473718616,0,Patient05,DS,SYN,0,1,CGG
343,0.0167,Rv2536,2860850,-4.092346559559427,0,Patient05,DS,SYN,0,0,CGG
344,0.1582,Rv2568c,2892974,-1.8438952236485835,0,Patient05,DS,SYN,0,1,TAT
345,0.0647,Rv3057c,3418383,-2.7379940774752822,0,Patient05,DS,NSY,0,0,GTA
346,0.0814,Rv3291c,3672238,-2.5083800059736423,0,Patient05,DS,SYN,0,1,GGA
347,0.0257,Rv3433c,3852139,-3.6612642870809626,0,Patient05,DS,NSY,0,0,CCG
348,0.0236,Rv3616c-Rv3617,4056515,-3.7465085669505727,0,Patient05,DS,IGR,0,1,-
349,0.0158,Rv3802c,4263501,-4.147745338949217,0,Patient05,DS,NSY,0,0,ACC
350,0.6198,Rv1636,1842627,-0.4783584336284892,0,Patient05,DS,SYN,2,1,AAG
351,0.627,Rv2510c,2827042,-0.4668087383492164,0,Patient05,DS,SYN,2,1,CGG
352,0.0318,Rv2568c,2892974,-3.4482889891960062,0,Patient05,DS,SYN,2,1,TAT
353,0.0218,Rv1069c,1193871,-3.825845309187094,0,Patient05,DS,NSY,2,0,TGG
354,0.0362,Rv1453,1638466,-3.318696160150412,0,Patient05,DS,NSY,2,1,CTC
355,0.016,Rv2473,2776028,-4.135166556742356,0,Patient05,DS,NSY,2,1,CCC
356,0.0156,Rv3418c,3837131,-4.1604843647266465,0,Patient05,DS,NSY,2,0,GAG
357,0.0245,Rv3447c,3866866,-3.709082161431456,0,Patient05,DS,NSY,2,0,CTC
358,0.1174,Rv1636,1842627,-2.1421683715881406,0,Patient05,DS,SYN,4,1,AAG
359,0.1151,Rv2510c,2827042,-2.1619539632543003,0,Patient05,DS,SYN,4,1,CGG
360,0.05860000000000001,Rv2568c,2892974,-2.8370205823991697,0,Patient05,DS,SYN,4,1,TAT
361,0.0803,Rv0219,262654,-2.521985658029421,0,Patient05,DS,NSY,4,1,ACG
362,0.0369,Rv1399c,1575587,-3.299543727935656,0,Patient05,DS,NSY,4,1,CCG
363,0.0286,Rv2073c,2330767,-3.55434856115633,0,Patient05,DS,NSY,4,0,GAC
364,0.0191,Rv2154c,2414523,-3.958066943929553,0,Patient05,DS,NSY,4,0,CTG
365,0.6468,Rv1636,1842627,-0.4357181512791852,0,Patient05,DS,SYN,6,1,AAG
366,0.6165999999999999,Rv2510c,2827042,-0.4835347635300872,0,Patient05,DS,SYN,6,1,CGG
367,0.0266,Rv2568c,2892974,-3.626844063194484,0,Patient05,DS,SYN,6,1,TAT
368,0.0186,Rv0252,303530,-3.9845936982629815,0,Patient05,DS,NSY,6,1,GTC
369,0.016399999999999998,Rv0404,484398,-4.110473944151985,0,Patient05,DS,NSY,6,1,GTC
370,0.029900000000000006,Rv1462,1650354,-3.5098967985854963,0,Patient05,DS,NSY,6,1,ACG
371,0.0258,Rv1894c-Rv1895,2142357,-3.657380787054565,0,Patient05,DS,IGR,6,1,-
372,0.0601,Rv2510c,2826798,-2.811745437440975,0,Patient05,DS,NSY,6,1,CGC
373,0.0166,Rv3232c,3609586,-4.098352583619639,0,Patient05,DS,NSY,6,0,CAT
374,0.8786,Rv1636,1842627,-0.1294255474404578,0,Patient05,DS,SYN,8,1,AAG
375,0.8684999999999999,Rv2510c,2827042,-0.1409876933009775,0,Patient05,DS,SYN,8,1,CGG
376,0.0704,Rv0877,976193,-2.65356201581814,0,Patient08,Hr,NSY,4,1,GGC
377,0.0166,Rv0980c-Rv0981,1096633,-4.098352583619639,0,Patient08,Hr,IGR,4,0,-
378,0.0387,Rv1181,1318094,-3.2519156789464008,0,Patient08,Hr,NSY,4,0,CGA
379,0.0407,Rv1605,1805570,-3.201527186533588,0,Patient08,Hr,SYN,4,1,TTG
380,0.128,Rv2127,2388996,-2.05572501506252,0,Patient08,Hr,NSY,4,1,TGG
381,0.0589,Rv2174,2436313,-2.831914188324596,0,Patient08,Hr,SYN,4,1,GAC
382,0.305,Rv2291,2563435,-1.1874435023747254,0,Patient08,Hr,NSY,4,1,CGA
383,0.1263,Rv2435c,2731801,-2.069095249625692,0,Patient08,Hr,NSY,4,1,CAA
384,0.0298,Rv2836c,3143445,-3.513246885470778,0,Patient08,Hr,NSY,4,0,CAG
385,0.0292,Rv2933,3259932,-3.5335865697079014,0,Patient08,Hr,SYN,4,1,GCC
386,0.1391,MTB000040-Rv2992c,3348753,-1.97256218005274,0,Patient08,Hr,IGR,4,1,-
387,0.3695000000000001,Rv3816c-Rv3817,4281581,-0.9956045385938804,0,Patient08,Hr,IGR,4,0,-
388,0.0154,Rv1110,1236778,-4.173387769562553,0,Patient08,Hr,SYN,6,1,GAG
389,0.0214,Rv1174c,1305900,-3.8443643569543307,0,Patient08,Hr,SYN,6,0,GTC
390,0.0191,Rv3138,3504271,-3.958066943929553,0,Patient08,Hr,NSY,6,1,CCA
391,0.3436,Rv3193c,3563111,-1.0682770888720368,0,Patient08,Hr,NSY,6,1,ATG
392,0.0201,MTB000020,1474414,-3.907035463917107,0,Patient08,Hr,-,8,1,-
393,0.3798,Rv2370c,2651413,-0.9681104806039516,0,Patient08,Hr,NSY,8,0,CTA
394,0.0195,Rv2474c,2776757,-3.9373408134124364,0,Patient08,Hr,SYN,8,1,GCC
395,0.2059,Rv3725-Rv3726,4171322,-1.5803646649483931,0,Patient08,Hr,IGR,8,1,-
396,0.0721,Rv1056-Rv1057,1179147,-2.629701234691234,1,Patient09,MDR,IGR,0,1,-
397,0.6990000000000001,Rv1186c,1328476,-0.3581045367483267,1,Patient09,MDR,NSY,0,1,CGA
398,0.015700000000000002,Rv1253,1401466,-4.154094566627874,1,Patient09,MDR,SYN,0,0,CGC
399,0.0423,Rv1368,1541367,-3.1629681929299047,1,Patient09,MDR,SYN,0,1,CCC
400,0.0487,Rv1954c,2201263,-3.0220762488935935,1,Patient09,MDR,NSY,0,1,TGG
401,0.021,Rv2062c,2317607,-3.863232841258714,1,Patient09,MDR,SYN,0,1,GTG
402,0.1054,Rv2933,3256228,-2.2499926428748758,1,Patient09,MDR,NSY,0,0,ACC
403,0.1373,Rv3137,3504149,-1.985586966208212,1,Patient09,MDR,NSY,0,0,GTG
404,0.0128,Rv0908,1013542,-4.358310108056566,1,Patient09,MDR,SYN,2,0,TCC
405,0.0311,Rv0018c,21679,-3.4705474597969483,1,Patient09,MDR,SYN,2,0,CCA
406,0.0235,Rv0228,273371,-3.7507548578320242,1,Patient09,MDR,NSY,2,1,GGT
407,0.0614,Rv0363c,442101,-2.7903454438290405,1,Patient09,MDR,NSY,2,1,GAC
408,0.1014,Rv0511-Rv0512,604545,-2.2886821878250543,1,Patient09,MDR,IGR,2,1,-
409,0.0097,Rv0895,998190,-4.6356293934728,1,Patient09,MDR,NSY,2,0,GGC
410,0.016399999999999998,Rv1864c,2111587,-4.110473944151985,1,Patient09,MDR,NSY,2,1,GGC
411,0.0123,Rv2070c,2328028,-4.3981560166037665,1,Patient09,MDR,SYN,2,0,GCC
412,0.0163,Rv2515c,2832335,-4.1165901711694195,1,Patient09,MDR,NSY,2,1,TCC
413,0.0341,Rv2932,3254114,-3.3784578946926658,1,Patient09,MDR,NSY,2,1,CCA
414,0.0178,Rv2940c,3278465,-4.028556821684099,1,Patient09,MDR,SYN,2,1,GAC
415,0.0305,Rv0703-Rv0704,802502,-3.4900285953687717,1,Patient09,MDR,IGR,4,1,-
417,0.0229,Rv1895,2143460,-3.776618368421943,1,Patient09,MDR,NSY,4,0,ACC
418,0.1035,Rv0908,1013542,-2.2681836662767134,1,Patient09,MDR,SYN,6,0,TCC
419,0.0875,Rv0228,273371,-2.436116485618568,1,Patient09,MDR,NSY,6,1,GGT
420,0.0674,Rv0895,998190,-2.697110261063876,1,Patient09,MDR,NSY,6,0,GGC
421,0.06709999999999999,Rv2070c,2328028,-2.7015712350045007,1,Patient09,MDR,SYN,6,0,GCC
422,0.016399999999999998,Rv0092,102263,-4.110473944151985,1,Patient09,MDR,NSY,6,1,GTC
423,0.0183,Rv0228,273993,-4.000854219134761,1,Patient09,MDR,NSY,6,0,CAC
424,0.034300000000000004,Rv0391,470594,-3.3726099248102432,1,Patient09,MDR,SYN,6,1,AAC
425,0.0305,Rv1392,1567112,-3.4900285953687717,1,Patient09,MDR,SYN,6,1,GGG
426,0.0291,Rv1592c,1793419,-3.5370171048046903,1,Patient09,MDR,NSY,6,0,TTG
427,0.0537,Rv1630,1833561,-2.9243422774673182,1,Patient09,MDR,NSY,6,1,ACC
428,0.0539,Rv1981c,2224989,-2.9206248010671856,1,Patient09,MDR,NSY,6,0,ACC
429,0.0435,Rv2247,2521840,-3.1349943408874985,1,Patient09,MDR,SYN,6,1,GGG
430,0.047699999999999985,Rv2308,2580510,-3.0428238810878416,1,Patient09,MDR,NSY,6,1,ACC
431,0.0781,Rv2933,3258071,-2.5497652221364966,1,Patient09,MDR,NSY,6,0,GAC
432,0.05690000000000001,Rv3191c-MTB000043,3558499,-2.866459937849852,1,Patient09,MDR,IGR,6,1,-
447,0.018000000000000002,Rv0026,30995,-4.017383521085971,1,Patient10,MDR,NSY,0,0,CCC
448,0.0199,Rv0125,151441,-3.9170355472516905,1,Patient10,MDR,SYN,0,1,GCG
449,0.2239,Rv0283,344560,-1.4965557553774278,1,Patient10,MDR,NSY,0,1,GTG
450,0.0165,Rv0326,392685,-4.104394898075602,1,Patient10,MDR,NSY,0,1,CTG
451,0.0181,Rv0341,410585,-4.011843340710357,1,Patient10,MDR,SYN,0,0,GCA
452,0.0178,Rv0409,494564,-4.028556821684099,1,Patient10,MDR,NSY,0,0,TGG
453,0.016200000000000003,Rv0444c-Rv0445c,533806,-4.122744036743798,1,Patient10,MDR,IGR,0,1,-
454,0.7843000000000001,Rv0475,566045,-0.2429636787635161,1,Patient10,MDR,SYN,0,1,GCC
455,0.0202,Rv0648,745410,-3.9020726745749776,1,Patient10,MDR,NSY,0,0,ACA
456,0.2268,Rv0676c,778059,-1.48368670712854,1,Patient10,MDR,NSY,0,1,AGC
457,0.0151,Rv0773c,867290,-4.193060535161258,1,Patient10,MDR,NSY,0,1,GCC
458,0.0161,Rv0825c,919488,-4.1289360069917205,1,Patient10,MDR,SYN,0,0,CGT
459,0.0158,Rv0853c,950161,-4.147745338949217,1,Patient10,MDR,NSY,0,0,AGC
460,0.0172,Rv0860,956843,-4.06284589516273,1,Patient10,MDR,NSY,0,1,ATC
461,0.0172,Rv0884c,981670,-4.06284589516273,1,Patient10,MDR,SYN,0,1,CGG
462,0.019,Rv0893c-Rv0894,996428,-3.963316299815697,1,Patient10,MDR,IGR,0,1,-
463,0.0183,Rv0922-Rv0923c,1029483,-4.000854219134761,1,Patient10,MDR,IGR,0,1,-
464,0.1423,Rv1004c,1121137,-1.9498177738863305,1,Patient10,MDR,NSY,0,0,CCG
465,0.018000000000000002,Rv1020,1141949,-4.017383521085971,1,Patient10,MDR,SYN,0,1,TTG
466,0.0167,Rv1080c-Rv1081c,1205849,-4.092346559559427,1,Patient10,MDR,IGR,0,1,-
467,0.1341,Rv1095,1223263,-2.0091694886945044,1,Patient10,MDR,SYN,0,1,ACC
468,0.0153,Rv1378c,1552097,-4.179902450583747,1,Patient10,MDR,SYN,0,1,TTG
469,0.016200000000000003,Rv1527c,1727628,-4.122744036743798,1,Patient10,MDR,NSY,0,1,CCG
470,0.0173,Rv1730c,1956984,-4.057048777478403,1,Patient10,MDR,NSY,0,0,GTC
471,0.040199999999999986,Rv1730c,1956995,-3.213888283357162,1,Patient10,MDR,NSY,0,1,GGG
472,0.06280000000000001,Rv1747,1975115,-2.7678002055079842,1,Patient10,MDR,SYN,0,1,CTG
473,0.018500000000000003,Rv1782,2018054,-3.989984546897858,1,Patient10,MDR,SYN,0,1,TAC
474,0.2263,Rv1796,2035317,-1.4858937263426453,1,Patient10,MDR,NSY,0,1,GCC
475,0.0202,Rv1995,2238241,-3.9020726745749776,1,Patient10,MDR,NSY,0,1,GCA
476,0.0347,Rv2030c,2277636,-3.3610155920293234,1,Patient10,MDR,NSY,0,0,CAG
477,0.07919999999999999,Rv2118c,2378063,-2.5357789801617567,1,Patient10,MDR,NSY,0,1,TAT
478,0.2286,Rv2280,2551803,-1.4757815276214268,1,Patient10,MDR,NSY,0,1,GTC
479,0.018500000000000003,Rv2307c-Rv2307A,2578730,-3.989984546897858,1,Patient10,MDR,IGR,0,0,-
480,0.0968,Rv2332,2605445,-2.3351082846996056,1,Patient10,MDR,NSY,0,1,GGG
481,0.016200000000000003,Rv2332,2606610,-4.122744036743798,1,Patient10,MDR,SYN,0,1,CCG
482,0.0188,Rv2345,2624618,-3.9738984091462335,1,Patient10,MDR,NSY,0,0,CAG
483,0.0165,Rv2434c,2729226,-4.104394898075602,1,Patient10,MDR,SYN,0,1,GAG
484,0.07719999999999999,Rv2621c,2948107,-2.5613558219514068,1,Patient10,MDR,NSY,0,1,GAG
485,0.019,Rv2994,3351632,-3.963316299815697,1,Patient10,MDR,NSY,0,1,GGC
486,0.0855,Rv3065,3430661,-2.4592389030394224,1,Patient10,MDR,NSY,0,1,GGC
487,0.0171,Rv3197A,3568622,-4.068676815473522,1,Patient10,MDR,NSY,0,1,TGC
488,0.0188,Rv3201c,3576665,-3.9738984091462335,1,Patient10,MDR,SYN,0,0,CGC
489,0.188,Rv3243c,3622912,-1.6713133161521878,1,Patient10,MDR,SYN,0,1,GTC
490,0.7786,Rv3273,3655495,-0.2502578438057817,1,Patient10,MDR,NSY,0,1,GAC
491,0.0894,Rv3350c-Rv3351c,3767194,-2.414634596802669,1,Patient10,MDR,IGR,0,1,-
492,0.0358,Rv3394c,3810957,-3.3298073855754824,1,Patient10,MDR,SYN,0,0,GCC
493,0.0153,Rv3770c-Rv3770A,4215793,-4.179902450583747,1,Patient10,MDR,IGR,0,0,-
494,0.0202,Rv3814c,4279370,-3.9020726745749776,1,Patient10,MDR,NSY,0,1,GTG
495,0.2084,Rv3884c,4365789,-1.5682959691029252,1,Patient10,MDR,NSY,0,0,GAG
496,0.0172,Rv3910,4398242,-4.06284589516273,1,Patient10,MDR,NSY,0,1,GTG
497,0.9993,Rv0475,566045,-0.0007002451143933149,1,Patient10,MDR,SYN,4,1,GCC
498,1.0,Rv3273,3655495,0.0,1,Patient10,MDR,NSY,4,1,GAC
499,0.3979,Rv0006,7570,-0.9215545615492542,1,Patient10,MDR,NSY,4,1,GCG
500,0.0646,Rv1082,1206940,-2.739540868193581,1,Patient10,MDR,NSY,4,1,GAC
501,0.1121,Rv1193,1335836,-2.1883639489040227,1,Patient10,MDR,NSY,4,1,GAT
502,0.0939,Rv1483,1673501,-2.36552489276792,1,Patient10,MDR,NSY,4,1,ACC
503,0.0195,Rv1876-Rv1877,2125869,-3.9373408134124364,1,Patient10,MDR,IGR,4,1,-
504,0.0645,Rv2970c,3325116,-2.7410900551804103,1,Patient10,MDR,SYN,4,1,CAT
505,0.048,Rv3436c,3855744,-3.036554268074246,1,Patient10,MDR,SYN,4,1,CTG
506,0.9978,Rv0475,566045,-0.0022024235552000394,1,Patient10,MDR,SYN,6,1,GCC
507,0.9931,Rv3273,3655495,-0.006923915072824197,1,Patient10,MDR,NSY,6,1,GAC
508,0.29600000000000004,Rv3350c-Rv3351c,3767194,-1.2173958246580765,1,Patient10,MDR,IGR,6,1,-
509,0.3726,Rv0006,7570,-0.9872498208146491,1,Patient10,MDR,NSY,6,1,GCG
510,0.1017,Rv1483,1673501,-2.285727975927623,1,Patient10,MDR,NSY,6,1,ACC
511,0.2875,Rv0006,7582,-1.246532418744732,1,Patient10,MDR,NSY,6,1,GAC
512,0.0717,Rv0405,489758,-2.6352645313765626,1,Patient10,MDR,NSY,6,0,GCT
513,0.0724,Rv0726c,819259,-2.6255489795904663,1,Patient10,MDR,NSY,6,1,CCC
514,0.017,Rv0980c-Rv0981,1096633,-4.0745419349259215,1,Patient10,MDR,IGR,6,0,-
515,0.3003,Rv1157c,1284167,-1.2029733039928523,1,Patient10,MDR,NSY,6,1,AGA
516,0.0394,Rv1482c-Rv1483,1673385,-3.2339894626782484,1,Patient10,MDR,IGR,6,0,-
517,0.0252,Rv1534-Rv1535,1735614,-3.6809112844647593,1,Patient10,MDR,IGR,6,1,-
521,0.0774,Rv0283,344560,-2.5587684983864563,1,Patient10,MDR,NSY,8,1,GTG
522,0.9352,Rv0475,566045,-0.06699486882427848,1,Patient10,MDR,SYN,8,1,GCC
523,0.0873,Rv2280,2551803,-2.4384048161365803,1,Patient10,MDR,NSY,8,1,GTC
524,0.9155,Rv3273,3655495,-0.08828491486757167,1,Patient10,MDR,NSY,8,1,GAC
525,0.2727,Rv3350c-Rv3351c,3767194,-1.299382989130594,1,Patient10,MDR,IGR,8,1,-
526,0.597,Rv0006,7570,-0.515838165589535,1,Patient10,MDR,NSY,8,1,GCG
527,0.2763,Rv0006,7582,-1.2862680470527663,1,Patient10,MDR,NSY,8,1,GAC
528,0.2529,Rv1157c,1284167,-1.3747611253062175,1,Patient10,MDR,NSY,8,1,AGA
529,0.0166,Rv0362,440785,-4.098352583619639,1,Patient10,MDR,SYN,8,1,ACC
530,0.0269,Rv0786c,881082,-3.615628992374344,1,Patient10,MDR,NSY,8,0,ACC
532,0.0705,Rv2522c,2839506,-2.652142569163914,1,Patient10,MDR,SYN,8,1,TCC
533,0.0833,Rv3015c,3375071,-2.48530672980934,1,Patient10,MDR,NSY,8,0,GAA
534,0.0207,Rv3116,3482932,-3.8776215787108135,1,Patient10,MDR,NSY,8,0,GGT