Dataset Open Access

HOMOLOBIND predictions

Davis, Fred


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  <identifier identifierType="DOI">10.5281/zenodo.29597</identifier>
  <creators>
    <creator>
      <creatorName>Davis, Fred</creatorName>
      <givenName>Fred</givenName>
      <familyName>Davis</familyName>
    </creator>
  </creators>
  <titles>
    <title>HOMOLOBIND predictions</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2015</publicationYear>
  <dates>
    <date dateType="Issued">2015-08-26</date>
  </dates>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/29597</alternateIdentifier>
  </alternateIdentifiers>
  <rightsList>
    <rights rightsURI="https://opensource.org/licenses/GPL-3.0">GNU General Public License v3.0 only</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This dataset contains&amp;nbsp;results of the HOMOLOBIND program ( http://fredpdavis.com/homolobind )&amp;nbsp;for proteome-wide prediction of protein and ligand binding sites, described in:&lt;/p&gt;

&lt;p&gt;Proteome-wide prediction of overlapping protein and ligand binding sites using structure.&lt;br /&gt;
Davis FP,&amp;nbsp;&lt;em&gt;Molecular BioSystems&lt;/em&gt;, 2011&lt;br /&gt;
http://dx.doi.org/10.1039/C0MB00200C&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;The files contain predicted binding sites for&amp;nbsp;several complete proteomes from the Nov 1, 2009 release&amp;nbsp;of SUPERFAMILY:&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;Homo sapiens: hs.homolobind.out.gz&lt;/li&gt;
	&lt;li&gt;Mus musculus: mm.homolobind.out.gz&lt;/li&gt;
	&lt;li&gt;Drosophila melanogaster: dm.homolobind.out.gz&lt;/li&gt;
	&lt;li&gt;Caenorhabditis elegans: ce.homolobind.out.gz&lt;/li&gt;
	&lt;li&gt;Saccharomyces cerevisiae: sc.homolobind.out.gz&lt;/li&gt;
	&lt;li&gt;Escherichia coli: ec.homolobind.out.gz&lt;/li&gt;
	&lt;li&gt;NCBI viral sequence set: vl.homolobind.out.gz&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;</description>
  </descriptions>
</resource>
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