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CTCF loop analysis and prediction scripts and datasets

Oti, Martin


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  <dc:creator>Oti, Martin</dc:creator>
  <dc:date>2015-11-30</dc:date>
  <dc:description>Additional files accompanying the study of experimental and predicted CTCF loops in human cell lines by Oti et al.

ctcfloopscripts_v1.0.zip: Scripts used in the analysis of CTCF-mediated loops in human cell lines; both experimental ChIA-PET loops as well as predicted loops based on ChIP-seq data. Zipped file.

ctcf_predictedloops_ENCODE_chipseq_datasets.tar.gz: Predicted CTCF loops for 100 ENCODE ChIP-seq datasets. Gzipped tar file.

fimo_ctcfmotifs_MA0139_hg19_2.5e-4.bed.gz: genome-wide CTCF motifs in human genome (hg19) detected by FIMO tool.</dc:description>
  <dc:identifier>https://zenodo.org/record/29423</dc:identifier>
  <dc:identifier>10.5281/zenodo.29423</dc:identifier>
  <dc:identifier>oai:zenodo.org:29423</dc:identifier>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>https://creativecommons.org/publicdomain/zero/1.0/legalcode</dc:rights>
  <dc:title>CTCF loop analysis and prediction scripts and datasets</dc:title>
  <dc:type>info:eu-repo/semantics/other</dc:type>
  <dc:type>dataset</dc:type>
</oai_dc:dc>
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