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CTCF loop analysis and prediction scripts and datasets

Oti, Martin

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<oai_dc:dc xmlns:dc="" xmlns:oai_dc="" xmlns:xsi="" xsi:schemaLocation="">
  <dc:creator>Oti, Martin</dc:creator>
  <dc:description>Additional files accompanying the study of experimental and predicted CTCF loops in human cell lines by Oti et al. Scripts used in the analysis of CTCF-mediated loops in human cell lines; both experimental ChIA-PET loops as well as predicted loops based on ChIP-seq data. Zipped file.

ctcf_predictedloops_ENCODE_chipseq_datasets.tar.gz: Predicted CTCF loops for 100 ENCODE ChIP-seq datasets. Gzipped tar file.

fimo_ctcfmotifs_MA0139_hg19_2.5e-4.bed.gz: genome-wide CTCF motifs in human genome (hg19) detected by FIMO tool.</dc:description>
  <dc:title>CTCF loop analysis and prediction scripts and datasets</dc:title>
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