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CTCF loop analysis and prediction scripts and datasets

Oti, Martin


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{
  "description": "<p>Additional files accompanying the study of experimental and predicted CTCF loops in human cell lines by Oti et al.</p>\n\n<p>ctcfloopscripts_v1.0.zip: Scripts used in the analysis of CTCF-mediated loops in human cell lines; both experimental ChIA-PET loops as well as predicted loops based on ChIP-seq data. Zipped file.</p>\n\n<p>ctcf_predictedloops_ENCODE_chipseq_datasets.tar.gz: Predicted CTCF loops for 100 ENCODE ChIP-seq datasets. Gzipped tar file.</p>\n\n<p>fimo_ctcfmotifs_MA0139_hg19_2.5e-4.bed.gz: genome-wide CTCF motifs in human genome (hg19) detected by FIMO tool.</p>", 
  "license": "https://creativecommons.org/publicdomain/zero/1.0/legalcode", 
  "creator": [
    {
      "affiliation": "Radboud University Nijmegen, The Netherlands", 
      "@type": "Person", 
      "name": "Oti, Martin"
    }
  ], 
  "url": "https://zenodo.org/record/29423", 
  "datePublished": "2015-11-30", 
  "@context": "https://schema.org/", 
  "distribution": [
    {
      "contentUrl": "https://zenodo.org/api/files/48035372-5319-407f-9af6-a877e40cca44/ctcfloopscripts_v1.0.zip", 
      "encodingFormat": "zip", 
      "@type": "DataDownload"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/48035372-5319-407f-9af6-a877e40cca44/ctcf_predictedloops_ENCODE_chipseq_datasets.tar.gz", 
      "encodingFormat": "gz", 
      "@type": "DataDownload"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/48035372-5319-407f-9af6-a877e40cca44/fimo_ctcfmotifs_MA0139_hg19_2.5e-4.bed.gz", 
      "encodingFormat": "gz", 
      "@type": "DataDownload"
    }
  ], 
  "identifier": "https://doi.org/10.5281/zenodo.29423", 
  "@id": "https://doi.org/10.5281/zenodo.29423", 
  "@type": "Dataset", 
  "name": "CTCF loop analysis and prediction scripts and datasets"
}
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