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CTCF loop analysis and prediction scripts and datasets

Oti, Martin


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.29423", 
  "title": "CTCF loop analysis and prediction scripts and datasets", 
  "issued": {
    "date-parts": [
      [
        2015, 
        11, 
        30
      ]
    ]
  }, 
  "abstract": "<p>Additional files accompanying the study of experimental and predicted CTCF loops in human cell lines by Oti et al.</p>\n\n<p>ctcfloopscripts_v1.0.zip: Scripts used in the analysis of CTCF-mediated loops in human cell lines; both experimental ChIA-PET loops as well as predicted loops based on ChIP-seq data. Zipped file.</p>\n\n<p>ctcf_predictedloops_ENCODE_chipseq_datasets.tar.gz: Predicted CTCF loops for 100 ENCODE ChIP-seq datasets. Gzipped tar file.</p>\n\n<p>fimo_ctcfmotifs_MA0139_hg19_2.5e-4.bed.gz: genome-wide CTCF motifs in human genome (hg19) detected by FIMO tool.</p>", 
  "author": [
    {
      "given": "Martin", 
      "family": "Oti"
    }
  ], 
  "type": "dataset", 
  "id": "29423"
}
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