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Gene–Tissue relationships from the TISSUES database

Daniel Himmelstein; Lars Juhl Jensen


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<oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:creator>Daniel Himmelstein</dc:creator>
  <dc:creator>Lars Juhl Jensen</dc:creator>
  <dc:date>2015-08-09</dc:date>
  <dc:description>We have completed an initial processing of the TISSUES data (repository, notebook). The main output of our analysis is merged.tsv.gz, a table where each row is a tissue (Uberon)--gene (Entrez) pair. For each pair, we provide 5 scores:


	score_text: score from the text mining channel
	score_knowledge: score from the UniProtKB/knowledge channel
	score_experiment: integrated score from the experimental channel
	score_experiment_unbiased: integrated score from the experimental channel without immunohistochemical staining data from the Human Protein Atlas
	score_integrated: integrated score combining everything
</dc:description>
  <dc:identifier>https://zenodo.org/record/27244</dc:identifier>
  <dc:identifier>10.5281/zenodo.27244</dc:identifier>
  <dc:identifier>oai:zenodo.org:27244</dc:identifier>
  <dc:relation>url:https://github.com/dhimmel/tissues/tree/v1.0</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:subject>TISSUES</dc:subject>
  <dc:subject>Rephetio</dc:subject>
  <dc:title>Gene–Tissue relationships from the TISSUES database</dc:title>
  <dc:type>info:eu-repo/semantics/other</dc:type>
  <dc:type>software</dc:type>
</oai_dc:dc>
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