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Gene–Tissue relationships from the TISSUES database

Daniel Himmelstein; Lars Juhl Jensen


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.27244", 
  "title": "Gene\u2013Tissue relationships from the TISSUES database", 
  "issued": {
    "date-parts": [
      [
        2015, 
        8, 
        9
      ]
    ]
  }, 
  "abstract": "<p>We have completed an initial processing of the TISSUES data (repository, notebook). The main output of our analysis is merged.tsv.gz, a table where each row is a tissue (Uberon)--gene (Entrez) pair. For each pair, we provide 5 scores:</p>\n\n<ul>\n\t<li>score_text: score from the text mining channel</li>\n\t<li>score_knowledge: score from the UniProtKB/knowledge channel</li>\n\t<li>score_experiment: integrated score from the experimental channel</li>\n\t<li>score_experiment_unbiased: integrated score from the experimental channel without immunohistochemical staining data from the Human Protein Atlas</li>\n\t<li>score_integrated: integrated score combining everything</li>\n</ul>", 
  "author": [
    {
      "family": "Daniel Himmelstein"
    }, 
    {
      "family": "Lars Juhl Jensen"
    }
  ], 
  "version": "v1.0", 
  "type": "article", 
  "id": "27244"
}
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