May 6, 2019 Dataset Open Access

Chee Huat (Linus) Eng; Long Cai

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  <dc:creator>Chee Huat (Linus) Eng</dc:creator>
  <dc:creator>Long Cai</dc:creator>
  <dc:date>2019-05-06</dc:date>
  <dc:description>These source data consist of the point locations of individual decoded mRNA dots in seqFISH+ experiments on NIH/3T3 cells. DAPI_experiment folder contains the DAPI stainings with other beads images. ROIs_experiment folders are the manual segmentation performed in ImageJ. We only performed segmentation on the whole single cells. In seqFISH+_NIH3T3_point_locations zip folder, there are 3 matlab files . One is gene name file, the other two files are point locations for replicate 1 and 2 seqFISH+ experiments in NIH/3T3 cells. The columns of the data represent field of view(FOV), Cell , and Gene. For example : FOV1 , Cell 5, Gene : Bgn to retrieve the point locations. </dc:description>
  <dc:identifier>https://zenodo.org/record/2669683</dc:identifier>
  <dc:identifier>10.5281/zenodo.2669683</dc:identifier>
  <dc:identifier>oai:zenodo.org:2669683</dc:identifier>
  <dc:relation>doi:10.5281/zenodo.2669682</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>https://creativecommons.org/licenses/by/4.0/legalcode</dc:rights>
  <dc:source>Nature</dc:source>
  <dc:title>NIH3T3_point_locations for RNA seqFISH+ experiments</dc:title>
  <dc:type>info:eu-repo/semantics/other</dc:type>
  <dc:type>dataset</dc:type>
</oai_dc:dc>