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Report of the Service Integration with OpenRiskNet (Intermediate Report) (Deliverable 4.2)

Danyel, Jennen; Bayjanov, Jumamurat; Farcal, Lucian; Oki, Noffisat; Geerke, Daan; Doganis, Philip; Martens, Marvin; Willighagen, Egon; Gebele, Denis; Jacobs, Marc; Dudgeon, Tim; Lynch, Iseult; Exner, Thomas


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  <identifier identifierType="DOI">10.5281/zenodo.2596999</identifier>
  <creators>
    <creator>
      <creatorName>Danyel, Jennen</creatorName>
      <givenName>Jennen</givenName>
      <familyName>Danyel</familyName>
      <affiliation>Universiteit Maastricht</affiliation>
    </creator>
    <creator>
      <creatorName>Bayjanov, Jumamurat</creatorName>
      <givenName>Jumamurat</givenName>
      <familyName>Bayjanov</familyName>
      <affiliation>Universiteit Maastricht</affiliation>
    </creator>
    <creator>
      <creatorName>Farcal, Lucian</creatorName>
      <givenName>Lucian</givenName>
      <familyName>Farcal</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-5773-2024</nameIdentifier>
      <affiliation>Edelweiss Connect</affiliation>
    </creator>
    <creator>
      <creatorName>Oki, Noffisat</creatorName>
      <givenName>Noffisat</givenName>
      <familyName>Oki</familyName>
      <affiliation>Edelweiss Connect</affiliation>
    </creator>
    <creator>
      <creatorName>Geerke, Daan</creatorName>
      <givenName>Daan</givenName>
      <familyName>Geerke</familyName>
      <affiliation>Vrije Universiteit Amsterdam</affiliation>
    </creator>
    <creator>
      <creatorName>Doganis, Philip</creatorName>
      <givenName>Philip</givenName>
      <familyName>Doganis</familyName>
      <affiliation>National Technical University Of Athens</affiliation>
    </creator>
    <creator>
      <creatorName>Martens, Marvin</creatorName>
      <givenName>Marvin</givenName>
      <familyName>Martens</familyName>
      <affiliation>Universiteit Maastricht</affiliation>
    </creator>
    <creator>
      <creatorName>Willighagen, Egon</creatorName>
      <givenName>Egon</givenName>
      <familyName>Willighagen</familyName>
      <affiliation>Universiteit Maastricht</affiliation>
    </creator>
    <creator>
      <creatorName>Gebele, Denis</creatorName>
      <givenName>Denis</givenName>
      <familyName>Gebele</familyName>
      <affiliation>Johannes Gutenberg-Universität Mainz</affiliation>
    </creator>
    <creator>
      <creatorName>Jacobs, Marc</creatorName>
      <givenName>Marc</givenName>
      <familyName>Jacobs</familyName>
      <affiliation>Fraunhofer Gesellschaft Zur Foerderung Der Angewandten Forschung E.V.</affiliation>
    </creator>
    <creator>
      <creatorName>Dudgeon, Tim</creatorName>
      <givenName>Tim</givenName>
      <familyName>Dudgeon</familyName>
      <affiliation>Informatics Matters Ltd.</affiliation>
    </creator>
    <creator>
      <creatorName>Lynch, Iseult</creatorName>
      <givenName>Iseult</givenName>
      <familyName>Lynch</familyName>
      <affiliation>University Of Birmingham</affiliation>
    </creator>
    <creator>
      <creatorName>Exner, Thomas</creatorName>
      <givenName>Thomas</givenName>
      <familyName>Exner</familyName>
      <affiliation>Edelweiss Connect</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Report of the Service Integration with OpenRiskNet (Intermediate Report) (Deliverable 4.2)</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2019</publicationYear>
  <subjects>
    <subject>e-infrastructure</subject>
    <subject>toxicology</subject>
    <subject>services</subject>
    <subject>databases</subject>
    <subject>workflows</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2019-03-18</date>
  </dates>
  <resourceType resourceTypeGeneral="Text">Report</resourceType>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/2596999</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.2596998</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This report describes the status of the service integration including numbers of active services provided by the consortium, associated partners and other third parties. The work described in this report addresses all areas and tasks of WP4 (i.e. Toxicology, Chemical Properties and Bioassay Databases, Omics Databases, Knowledge Bases and Data Mining, Ontology Services, Processing and Analysis, Predictive Toxicology, Workflows, Visualisation and Reporting). Due to their importance for service integration, we also reference to work performed in WP1 on case studies and in WP2 on e-infrastructure interoperability and deployment.&lt;br&gt;
&lt;br&gt;
This report is an update of &lt;a href="https://doi.org/10.5281/zenodo.1484309"&gt;Deliverable D4.1&lt;/a&gt; &amp;ldquo;Report of the Service Integration with OpenRiskNet (Initial Deployment)&amp;rdquo; and is also directly linked to other deliverables (e.g. D1.3 Final definition of case studies, D2.2. Initial API version provided to providers of services and D2.3 Report on deployment of virtual infrastructures with service discovery and container orchestration).&lt;br&gt;
&lt;br&gt;
The report includes examples on how the services provided by the consortium partners and associated partners are combined and integrated into workflows providing solutions to answer the specific case study questions. Further details are presented on how the services from the Implementation Challenge are strengthening the demonstration on the case studies.&lt;br&gt;
&lt;br&gt;
The extensive description of the integration status (a process based on a predefined set of eight operations) is completed by statistics on the services integrated into the OpenRiskNet e-infrastructure (e.g. categories, type, applicability domain and areas covered, targeted users or industries).&lt;/p&gt;</description>
  </descriptions>
  <fundingReferences>
    <fundingReference>
      <funderName>European Commission</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">10.13039/501100000780</funderIdentifier>
      <awardNumber awardURI="info:eu-repo/grantAgreement/EC/H2020/731075/">731075</awardNumber>
      <awardTitle>OpenRiskNet: Open e-Infrastructure to Support Data Sharing, Knowledge Integration and in silico Analysis and Modelling in Risk Assessment</awardTitle>
    </fundingReference>
  </fundingReferences>
</resource>
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