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Processed read counts from macrophage RNA-seq and ATAC-seq experiments

Alasoo, Kaur; Gaffney, Daniel


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  <dc:creator>Alasoo, Kaur</dc:creator>
  <dc:creator>Gaffney, Daniel</dc:creator>
  <dc:date>2017-01-25</dc:date>
  <dc:description>RNA-seq files:


	RNA_count_matrix.txt.gz - raw read counts
	RNA_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package
	RNA_gene_metadata.txt.gz - information about the genes
	RNA_sample_metadata.txt.gz - information about the samples


ATAC-seq files:


	ATAC_count_matrix.txt.gz - raw read counts
	ATAC_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package
	ATAC_peak_metadata.txt.gz - peak coordinates and other metadata
	ATAC_sample_metadata.txt.gz - sample metadata
</dc:description>
  <dc:identifier>https://zenodo.org/record/259661</dc:identifier>
  <dc:identifier>10.5281/zenodo.259661</dc:identifier>
  <dc:identifier>oai:zenodo.org:259661</dc:identifier>
  <dc:relation>doi:10.5281/zenodo.748695</dc:relation>
  <dc:relation>url:https://zenodo.org/communities/macrophage-gene-expression-genetics</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>http://creativecommons.org/licenses/by/4.0/legalcode</dc:rights>
  <dc:title>Processed read counts from macrophage RNA-seq and ATAC-seq experiments</dc:title>
  <dc:type>info:eu-repo/semantics/other</dc:type>
  <dc:type>dataset</dc:type>
</oai_dc:dc>
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