Dataset Open Access

Sample datasets for Transposon insertion sequencing analysis tutorial

Delphine Lariviere; Anton Nekrutenko


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    "description": "<p>The dataset contains five files:</p>\n\n<ol>\n\t<li>Tnseq-Tutorial-reads.fastqsanger.gz&nbsp; - A subset of TnSeq reads published in&nbsp; `Santiago, M., Matano, L. M., Moussa, S. H., Gilmore, M. S., Walker, S., &amp; Meredith, T. C. (2015). A new platform for ultra-high density Staphylococcus aureus transposon libraries. <em>BMC Genomics</em>, <em>16</em>(1), 1&ndash;18. http://doi.org/10.1186/s12864-015-1361-3`</li>\n\t<li>condition_barcodes.fasta&nbsp;-&nbsp; Set of barcodes to separate reads from different experimental conditions</li>\n\t<li>construct_barcodes.fasta&nbsp; - Set of barcodes to separate reads from different transposon constructs</li>\n\t<li>staph_aur.fasta&nbsp;: Genome&nbsp;file for <em>Staphylococcus aureus&nbsp;</em></li>\n\t<li>staph_aur.fasta&nbsp;: Annotation file for <em>Staphylococcus aureus&nbsp;</em></li>\n</ol>", 
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    "title": "Sample datasets for Transposon insertion sequencing analysis tutorial", 
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    "keywords": [
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    "publication_date": "2019-02-27", 
    "creators": [
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        "affiliation": "The Pennsylvania State University", 
        "name": "Delphine Lariviere"
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