There is a newer version of this record available.

Dataset Open Access

Data for the "Systems NMR: simultaneous quantification of RNA, protein, and metabolite reaction dynamics for biomolecular network analysis."

Nikolaev, Yaroslav V.; Ripin, Nina; Soste, Martin; Picotti, Paola; Iber, Dagmar; Allain, Frédéric


JSON Export

{
  "files": [
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170310_IN70a_pR02_co-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:0118b8c756def9d2aa2ab20bf0578bc1", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170310_IN70a_pR02_co-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 550576117
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170313_IN71a_p114_co-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:aa9976712819cfa3b6106c796383051a", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170313_IN71a_p114_co-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 219556465
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170322_IN75a_EV2_co-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:27c638057e74a60338f52841c25534f3", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170322_IN75a_EV2_co-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 179956193
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170402_IN75j_EV2_post-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:270a04b7895895231a77c9c872ea6eb7", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170402_IN75j_EV2_post-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 54231673
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170404_IN72i_SMN2_post-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:53b245aa4721527792f14c7210214e6b", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170404_IN72i_SMN2_post-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 98219528
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170426_IN72a_SMN2_co-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:fc3aa3b5037aea94d8ec1604a7f4542f", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170426_IN72a_SMN2_co-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 266407483
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170427_IN71i_SMN1_post-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:30bfb524d9c0a22c0b9686d408f28b02", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170427_IN71i_SMN1_post-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 88598080
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170515_IN75b_EV2_co-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:75800f7ef3521d032f52ebfcb24f0e84", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170515_IN75b_EV2_co-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 218870518
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/170516_IN75k_EV2_post-UP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:494f8d035a72816650a33862d712feb7", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "170516_IN75k_EV2_post-UP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 128532263
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/180314_IN72b_SMN214_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:399230001e9d0d9d9583afc9cc9969e7", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "180314_IN72b_SMN214_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 213588649
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/180702_IN70b_pR02_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:0745f074eacbdba27891c3d7dc369dd4", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "180702_IN70b_pR02_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 370060450
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/180914_IN71b_SMN1_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:460c3b7d45f5ea0e36930a1755ec30c1", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "180914_IN71b_SMN1_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 399031450
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/181206_IN72q_SMN2_free_303K_600.tar.gz"
      }, 
      "checksum": "md5:45d3e2cb3c7098549e343cc0a6b14b8c", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "181206_IN72q_SMN2_free_303K_600.tar.gz", 
      "type": "gz", 
      "size": 67590095
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190109_IN71q_SMN1_free_303K_600.tar.gz"
      }, 
      "checksum": "md5:04a85f14221019b1e3c822cd2adbf945", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190109_IN71q_SMN1_free_303K_600.tar.gz", 
      "type": "gz", 
      "size": 44382923
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190110_IN71c_SMN1_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:524679008f69cf54f9caa3c3a06f5223", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190110_IN71c_SMN1_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 140364947
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190111_IN70c_R02_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:904ee28b9e3e0d49bff710d1345d3139", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190111_IN70c_R02_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 225494459
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190111_IN72c_SMN2_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:83d18c7f0a50f0c1062f8443b8bd91ca", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190111_IN72c_SMN2_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 158640789
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190112_IN75h_EV2_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:6bed1bc86c4f83abbe27c91acbef7faa", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190112_IN75h_EV2_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 211391962
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190113_IN75z_EV2_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:74aa15a5aea1bed2fb8f2af7bfb8dbdf", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190113_IN75z_EV2_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 234431195
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190117_IN72d_SMN2_co-NUP1_303K_600.tar.gz"
      }, 
      "checksum": "md5:d35507922eb2ade9dd57258a71189811", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190117_IN72d_SMN2_co-NUP1_303K_600.tar.gz", 
      "type": "gz", 
      "size": 188865396
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190125_IN72r_SMN2_free_303K_600.tar.gz"
      }, 
      "checksum": "md5:1d81ec892e3d23f106ec35821d2a8971", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190125_IN72r_SMN2_free_303K_600.tar.gz", 
      "type": "gz", 
      "size": 28659400
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095/190128_IN71r_SMN1_free_303K_600.tar.gz"
      }, 
      "checksum": "md5:612d4909ec8f629aa5fc1d0788eee0df", 
      "bucket": "04c6ec3c-3355-45a0-a34a-132f95c6f095", 
      "key": "190128_IN71r_SMN1_free_303K_600.tar.gz", 
      "type": "gz", 
      "size": 72772642
    }
  ], 
  "owners": [
    2966
  ], 
  "doi": "10.5281/zenodo.2554066", 
  "stats": {
    "version_unique_downloads": 17.0, 
    "unique_views": 74.0, 
    "views": 89.0, 
    "version_views": 154.0, 
    "unique_downloads": 13.0, 
    "version_unique_views": 110.0, 
    "volume": 15917553194.0, 
    "version_downloads": 129.0, 
    "downloads": 80.0, 
    "version_volume": 25008538419.0
  }, 
  "links": {
    "doi": "https://doi.org/10.5281/zenodo.2554066", 
    "conceptdoi": "https://doi.org/10.5281/zenodo.2554065", 
    "bucket": "https://zenodo.org/api/files/04c6ec3c-3355-45a0-a34a-132f95c6f095", 
    "conceptbadge": "https://zenodo.org/badge/doi/10.5281/zenodo.2554065.svg", 
    "html": "https://zenodo.org/record/2554066", 
    "latest_html": "https://zenodo.org/record/3544840", 
    "badge": "https://zenodo.org/badge/doi/10.5281/zenodo.2554066.svg", 
    "latest": "https://zenodo.org/api/records/3544840"
  }, 
  "conceptdoi": "10.5281/zenodo.2554065", 
  "created": "2019-02-13T08:54:08.715434+00:00", 
  "updated": "2020-01-24T19:23:49.476841+00:00", 
  "conceptrecid": "2554065", 
  "revision": 8, 
  "id": 2554066, 
  "metadata": {
    "access_right_category": "success", 
    "doi": "10.5281/zenodo.2554066", 
    "description": "<p>This dataset contains raw NMR data used in the publication.</p>\n\n<p>Detailed protocol for the presented NMR setup and analysis is included in the publication, and&nbsp;at&nbsp;https://github.com/systemsnmr/ivtnmr</p>", 
    "language": "eng", 
    "title": "Data for the \"Systems NMR: simultaneous quantification of RNA, protein, and metabolite reaction dynamics for biomolecular network analysis.\"", 
    "license": {
      "id": "CC-BY-4.0"
    }, 
    "relations": {
      "version": [
        {
          "count": 2, 
          "index": 0, 
          "parent": {
            "pid_type": "recid", 
            "pid_value": "2554065"
          }, 
          "is_last": false, 
          "last_child": {
            "pid_type": "recid", 
            "pid_value": "3544840"
          }
        }
      ]
    }, 
    "version": "v0.1", 
    "keywords": [
      "NMR", 
      "Systems Biology", 
      "Network modeling", 
      "Analytical biochemistry", 
      "Biochemical reaction networks"
    ], 
    "publication_date": "2019-01-31", 
    "creators": [
      {
        "orcid": "0000-0002-1479-7474", 
        "affiliation": "ETH Zurich", 
        "name": "Nikolaev, Yaroslav V."
      }, 
      {
        "orcid": "0000-0001-6099-6506", 
        "affiliation": "ETH Zurich", 
        "name": "Ripin, Nina"
      }, 
      {
        "affiliation": "ETH Zurich", 
        "name": "Soste, Martin"
      }, 
      {
        "orcid": "0000-0002-4109-3552", 
        "affiliation": "ETH Zurich", 
        "name": "Picotti, Paola"
      }, 
      {
        "orcid": "0000-0001-8051-1035", 
        "affiliation": "ETH Zurich", 
        "name": "Iber, Dagmar"
      }, 
      {
        "orcid": "0000-0002-2131-6237", 
        "affiliation": "ETH Zurich", 
        "name": "Allain, Fr\u00e9d\u00e9ric"
      }
    ], 
    "access_right": "open", 
    "resource_type": {
      "type": "dataset", 
      "title": "Dataset"
    }, 
    "related_identifiers": [
      {
        "scheme": "doi", 
        "identifier": "10.5281/zenodo.2554065", 
        "relation": "isVersionOf"
      }
    ]
  }
}
154
129
views
downloads
All versions This version
Views 15489
Downloads 12980
Data volume 25.0 GB15.9 GB
Unique views 11074
Unique downloads 1713

Share

Cite as