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Dataset Open Access

Complete Rxivist dataset of scraped bioRxiv data

Abdill, Richard J.; Blekhman, Ran

rxivist.org allows readers to sort and filter the tens of thousands of preprints posted to bioRxiv. Rxivist uses a custom web crawler to index all papers on biorxiv.org; this is a snapshot of Rxivist the production database. The version number indicates the date on which the snapshot was taken. See the included "figures.md" file (or on GitHub) for instructions on how to use the "rxivist.backup" file to import data into a PostgreSQL database server.

Please note this is a different repository than the one used for the Rxivist manuscript—that is in a separate Zenodo repository. You're welcome (and encouraged!) to use this data in your research, but please cite our paper, available on bioRxiv.

Files (151.6 MB)
Name Size
figures.md
md5:a9c0d4fef531af6d57cf1fba0903c251
63.3 kB Download
rxivist.backup
md5:1c236fd8043149e696dc6bee662ba6e5
151.5 MB Download
244
48
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downloads
All versions This version
Views 24475
Downloads 4818
Data volume 3.2 GB1.5 GB
Unique views 18767
Unique downloads 3615

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