CoordinateCleaner-v2.0-4.zip
ropensci-CoordinateCleaner-3a3f294
.Rbuildignore
762 Bytes
.gitignore
208 Bytes
.travis.yml
472 Bytes
CONTRIBUTING.md
387 Bytes
CRAN-RELEASE
129 Bytes
CoordinateCleaner.Rproj
303 Bytes
DESCRIPTION
2.7 kB
NAMESPACE
2.2 kB
NEWS.md
2.4 kB
R
CleanCoordinates.R
3.6 kB
CleanCoordinatesDS.R
1.7 kB
CleanCoordinatesFOS.R
3.2 kB
CoordinateCleaner-package.R
5.8 kB
cc_cap.R
6.4 kB
cc_cen.R
5.3 kB
cc_coun.R
3.2 kB
cc_dupl.R
2.2 kB
cc_equ.R
1.7 kB
cc_gbif.R
4.2 kB
cc_inst.R
7.1 kB
cc_iucn.R
4.8 kB
cc_outl.R
11.0 kB
cc_sea.R
5.0 kB
cc_urb.R
3.6 kB
cc_val.R
1.7 kB
cc_zero.R
2.0 kB
cd_ddmm.R
7.5 kB
cd_round.R
13.9 kB
cf_age.R
10.6 kB
cf_equal.R
1.5 kB
cf_outl.R
10.9 kB
cf_range.R
6.7 kB
clean_coordinates.R
16.2 kB
clean_dataset.R
8.2 kB
clean_fossils.R
12.1 kB
internal_clean_coordinate.R
718 Bytes
internal_clean_dataset.R
5.5 kB
internal_write_pyrate.R
233 Bytes
methods.spatialvalid.R
6.6 kB
write_pyrate.R
9.1 kB
README.md
4.9 kB
_pkgdown.yml
305 Bytes
codemeta.json
10.7 kB
cran-comments.md
97 Bytes
data
buffland.rda
488.7 kB
countryref.rda
120.6 kB
institutions.rda
339.6 kB
pbdb_example.rda
69.8 kB
docs
CONTRIBUTING.html
6.3 kB
articles
Background_comparison_other_software.html
11.3 kB
Background_dataset_level_cleaning.html
26.0 kB
Background_dataset_level_cleaning_files
figure-html
fig10-1.png
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fig5-1.png
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fig7-1.png
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fig8-1.png
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unnamed-chunk-2-1.png
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unnamed-chunk-3-1.png
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unnamed-chunk-4-1.png
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unnamed-chunk-5-1.png
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Background_the_institutions_database.html
15.4 kB
Background_the_institutions_database_files
figure-html
fig1-1.png
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fig2-1.png
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fig3-1.png
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fig4-1.png
13.4 kB
Cleaning_GBIF_data_with_CoordinateCleaner.html
51.5 kB
Cleaning_GBIF_data_with_CoordinateCleaner_files
figure-html
unnamed-chunk-13-1.png
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unnamed-chunk-14-1.png
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unnamed-chunk-15-1.png
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unnamed-chunk-16-1.png
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unnamed-chunk-4-1.png
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unnamed-chunk-5-1.png
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unnamed-chunk-8-1.png
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Cleaning_PBDB_fossils_with_CoordinateCleaner.html
42.8 kB
Cleaning_PBDB_fossils_with_CoordinateCleaner_files
figure-html
unnamed-chunk-15-1.png
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unnamed-chunk-16-1.png
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unnamed-chunk-17-1.png
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unnamed-chunk-24-1.png
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unnamed-chunk-24-2.png
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unnamed-chunk-25-1.png
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unnamed-chunk-25-2.png
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unnamed-chunk-26-1.png
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unnamed-chunk-26-2.png
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unnamed-chunk-27-1.png
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unnamed-chunk-27-2.png
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unnamed-chunk-6-1.png
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unnamed-chunk-7-1.png
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Quickstart_Flagging_problematic_coordinates_in_a_nutshell.html
24.1 kB
Quickstart_clean_coordinates.html
49.9 kB
Quickstart_clean_fossils.html
9.1 kB
Quickstart_how_to_run.html
13.9 kB
Quickstart_how_to_run_files
figure-html
unnamed-chunk-1-1.png
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unnamed-chunk-1-2.png
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unnamed-chunk-1-3.png
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unnamed-chunk-1-4.png
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unnamed-chunk-2-2.png
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unnamed-chunk-2-3.png
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unnamed-chunk-2-4.png
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Tutorial_Cleaning_GBIF_data_with_CoordinateCleaner.html
59.1 kB
Tutorial_Cleaning_GBIF_data_with_CoordinateCleaner_files
figure-html
unnamed-chunk-13-1.png
25.0 kB
unnamed-chunk-14-1.png
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unnamed-chunk-15-1.png
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unnamed-chunk-16-1.png
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unnamed-chunk-17-1.png
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unnamed-chunk-4-1.png
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unnamed-chunk-5-1.png
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unnamed-chunk-8-1.png
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unnamed-chunk-9-1.png
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Tutorial_Cleaning_PBDB_fossils_with_CoordinateCleaner.html
46.9 kB
Tutorial_Cleaning_PBDB_fossils_with_CoordinateCleaner_files
figure-html
unnamed-chunk-16-1.png
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unnamed-chunk-17-1.png
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unnamed-chunk-25-1.png
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unnamed-chunk-25-2.png
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unnamed-chunk-27-1.png
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unnamed-chunk-27-2.png
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unnamed-chunk-7-1.png
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Tutorial_Using_custom_gazetteers.html
14.0 kB
Tutorial_Using_custom_gazetteers_files
figure-html
unnamed-chunk-1-1.png
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unnamed-chunk-2-1.png
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unnamed-chunk-2-2.png
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Tutorial_geographic_outliers.html
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Tutorial_geographic_outliers_files
figure-html
unnamed-chunk-10-1.png
34.2 kB
unnamed-chunk-3-1.png
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unnamed-chunk-4-1.png
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unnamed-chunk-5-1.png
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unnamed-chunk-7-1.png
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unnamed-chunk-8-1.png
33.4 kB
unnamed-chunk-9-1.png
34.4 kB
comparison_other_software.html
10.7 kB
index.html
6.8 kB
inst
webpage_screenshot.png
992.9 kB
qs_clean_coordinates.html
49.6 kB
qs_clean_dataset.html
13.9 kB
qs_clean_dataset_files
figure-html
unnamed-chunk-1-1.png
13.2 kB
unnamed-chunk-1-10.png
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unnamed-chunk-1-2.png
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unnamed-chunk-1-3.png
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unnamed-chunk-1-4.png
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unnamed-chunk-1-5.png
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unnamed-chunk-1-6.png
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unnamed-chunk-1-7.png
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unnamed-chunk-1-8.png
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unnamed-chunk-1-9.png
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qs_clean_fossils.html
9.8 kB
qs_how_to_run.html
13.6 kB
qs_how_to_run_files
figure-html
unnamed-chunk-1-1.png
17.2 kB
unnamed-chunk-1-2.png
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unnamed-chunk-1-3.png
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unnamed-chunk-1-4.png
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unnamed-chunk-1-5.png
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unnamed-chunk-2-1.png
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unnamed-chunk-2-2.png
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unnamed-chunk-2-3.png
12.1 kB
unnamed-chunk-2-4.png
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t_geographic_outliers.html
27.0 kB
t_geographic_outliers_files
figure-html
unnamed-chunk-2-1.png
32.9 kB
unnamed-chunk-3-1.png
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unnamed-chunk-4-1.png
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unnamed-chunk-5-1.png
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authors.html
7.3 kB
docsearch.css
11.8 kB
docsearch.js
2.0 kB
index.html
14.0 kB
index_files
figure-html
unnamed-chunk-3-1.png
17.5 kB
unnamed-chunk-3-2.png
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unnamed-chunk-3-3.png
35.8 kB
unnamed-chunk-3-4.png
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unnamed-chunk-3-5.png
36.7 kB
link.svg
810 Bytes
news
index.html
12.1 kB
pkgdown.css
4.1 kB
pkgdown.js
3.4 kB
pkgdown.yml
846 Bytes
reference
CoordinateCleaner-package.html
7.4 kB
Coordinatecleaner-deprecated.html
7.2 kB
buffland.html
7.2 kB
cc_cap.html
19.2 kB
cc_cen.html
13.4 kB
cc_coun.html
12.0 kB
cc_dupl.html
23.8 kB
cc_equ.html
17.1 kB
cc_gbif.html
12.4 kB
cc_inst.html
15.4 kB
cc_iucn.html
17.0 kB
cc_outl.html
23.0 kB
cc_sea.html
12.9 kB
cc_urb.html
11.4 kB
cc_val.html
17.8 kB
cc_zero.html
11.6 kB
cd_ddmm.html
17.1 kB
cd_round-1.png
10.2 kB
cd_round-2.png
18.4 kB
cd_round-3.png
10.1 kB
cd_round-4.png
15.9 kB
cd_round-5.png
15.6 kB
cd_round.html
16.3 kB
cf_age.html
18.2 kB
cf_equal.html
11.2 kB
cf_outl.html
17.0 kB
cf_range.html
14.9 kB
clean_coordinates.html
23.4 kB
clean_dataset.html
19.3 kB
clean_fossils.html
23.3 kB
countryref.html
9.8 kB
index.html
11.5 kB
institutions.html
11.1 kB
landmass.html
6.5 kB
pbdb_example.html
11.0 kB
plot.spatialvalid-1.png
17.7 kB
plot.spatialvalid.html
11.9 kB
write_pyrate.html
15.6 kB
man
CoordinateCleaner-package.Rd
1.4 kB
Coordinatecleaner-deprecated.Rd
858 Bytes
buffland.Rd
602 Bytes
cc_cap.Rd
3.1 kB
cc_cen.Rd
3.4 kB
cc_coun.Rd
2.7 kB
cc_dupl.Rd
2.7 kB
cc_equ.Rd
2.1 kB
cc_gbif.Rd
2.6 kB
cc_inst.Rd
3.7 kB
cc_iucn.Rd
3.1 kB
cc_outl.Rd
4.8 kB
cc_sea.Rd
3.1 kB
cc_urb.Rd
2.3 kB
cc_val.Rd
2.1 kB
cc_zero.Rd
2.2 kB
cd_ddmm.Rd
4.2 kB
cd_round.Rd
4.1 kB
cf_age.Rd
4.4 kB
cf_equal.Rd
1.7 kB
cf_outl.Rd
4.7 kB
cf_range.Rd
3.3 kB
clean_coordinates.Rd
9.8 kB
clean_dataset.Rd
5.2 kB
clean_fossils.Rd
8.1 kB
countryref.Rd
1.6 kB
institutions.Rd
953 Bytes
pbdb_example.Rd
908 Bytes
plot.spatialvalid.Rd
1.9 kB
write_pyrate.Rd
3.8 kB
tests
testthat
Test_fossillevel_cleaning.R
4.5 kB
test_coordinatelevel_functions.R
8.7 kB
test_datasetlevel_functions.R
3.3 kB
test_wrapper_functions.R
3.5 kB
testthat.R
78 Bytes
vignettes
Background_comparison_other_software.Rmd
6.6 kB
Background_dataset_level_cleaning.Rmd
28.7 kB
Background_the_institutions_database.Rmd
13.5 kB
CoordinateCleaner.bib
39.7 kB
Quickstart_Flagging_problematic_coordinates_in_a_nutshell.Rmd
6.9 kB
Quickstart_clean_fossils.Rmd
1.3 kB
Tutorial_Cleaning_GBIF_data_with_CoordinateCleaner.Rmd
29.1 kB
Tutorial_Cleaning_PBDB_fossils_with_CoordinateCleaner.Rmd
18.4 kB
Tutorial_Using_custom_gazetteers.Rmd
3.6 kB
Tutorial_geographic_outliers.Rmd
16.9 kB
apa.csl
11.4 kB
inst
0005313-180730143533302.csv
96.7 MB
0006556-180730143533302.csv
11.6 MB
METADATA for Digital Distribution Maps of The IUCN Red List of Threatened Species.pdf
437.8 kB
ReadMe.txt
492 Bytes
Red List Terms & Conditions of Use.pdf
46.9 kB
analyses_matrix_Clean
2.2 kB
analyses_matrix_Error_fraction_0.2
2.2 kB
analyses_matrix_Error_fraction_0.5
2.2 kB
analyses_matrix_Error_fraction_1
1.4 kB
autocorrelation_simulations.Rds
6.0 MB
simulations_cd_ddmm.Rds
5.5 MB
species_20025.cpg
5 Bytes
species_20025.dbf
8.3 kB
species_20025.lyr
76.3 kB
species_20025.prj
145 Bytes
species_20025.sbn
164 Bytes
species_20025.sbx
124 Bytes
species_20025.shp
2.3 MB
species_20025.shp.xml
10.3 kB
species_20025.shx
116 Bytes
species_20025.zip
2.3 MB
webpage_screenshot.png
992.9 kB