MOSSCO 1.0.2 "decadal reference run"
- 1. Helmholtz-Zentrum Geesthacht
- 2. Institut für Ostseeforschung Warnemünde
Description
This release marks the code used by
PONE-D-18-31600
Physics or biology? Persistent chlorophyll accumulation in a shallow coastal sea explained by pathogens and carnivorous grazing K. Wirtz
One of the most striking patterns at the land--ocean interface is the massive increase of chlorophyll-a (CHL) from continental shelves towards the coast, a phenomenon that is classically linked to physical features. Here I propose that the coastal--offshore CHL gradient in a shallow sea has biological origins related to phytoplankton mortality that are neglected in state-of-the-art biogeochemical models. I integrate a trait-based ecosystem model into a modular coupling framework that is applied to the southern North Sea (SNS). The coupled model very well reproduces daily, seasonal and inter-annual (2000-2014) dynamics and meso-scale patterns in macronutrients, zooplankton biomass, and CHL as observed \emph{in situ} and by remote sensors. Numerical experiments reveal that coast--offshore CHL gradients may predominantly arise from a trophic effect as resolved by an increase in carnivorous grazing towards shallow waters. This carnivory gradient reflects higher near-coast abundance of juvenile fish and benthic filter feeders. The CHL gradient can be further sharpened by viral infection as a fast-responding loss process at intermediate to high phytoplankton concentrations. Viral control also prevents excessive and unrealistic blooms during late spring. Herbivores as often only ecological factor considered for explaining the spatio-temporal phytoplankton distribution are in this study supplemented by pathogens as well as pelagic and benthic carnivores as powerful agents, which are barely represented in current modeling but can mediate physical drivers of coastal ecosystems.
Files
platipodium/mossco-code-MOSSCO_1_0_2.zip
Files
(52.5 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/platipodium/mossco-code/tree/MOSSCO_1_0_2 (URL)