December 12, 2018 Software Open Access

Luke Chang; Eshin Jolly; Jin Hyun Cheong; Anton Burnashev; Andy Chen

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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.2229813", 
  "title": "cosanlab/nltools: 0.3.11", 
  "issued": {
    "date-parts": [
      [
        2018, 
        12, 
        12
      ]
    ]
  }, 
  "abstract": "<p><em>New Functionality</em></p>\n\n<ul>\n\t<li>Can now perform multi-region and/or searchlight based prediction using <code>Brain_Data.predict_multi</code></li>\n\t<li><code>Brain_Data.predict</code> now support multi-class classification</li>\n\t<li>New interactive plotting based on <code>nilearn</code> using <code>Brain_Data.iplot()</code></li>\n\t<li>plotting functions have been renamed to remove camel case (e.g. <code>plotBrain</code> -&gt; <code>plot_brain</code>)</li>\n\t<li><code>Brain_Data.plot</code> now integrates old plotting functions in method call using argument <code>view</code>. Still defaults to axial slices but can optionally display, <code>glass</code>, <code>mni</code> (for ortho slices) or <code>both</code></li>\n\t<li>new <code>distance_correlation</code>, <code>procrustes_distance</code>, <code>jackknife_permutation</code> functions in <code>nltools.stats</code></li>\n\t<li><code>expand_mask</code>, <code>collapse_mask</code>, <code>create_sphere</code> can now take custom masks</li>\n\t<li><code>Brain_Data.standarize</code> gains new axis argument</li>\n</ul>\n\n<p><em>Bug Fixes</em></p>\n\n<ul>\n\t<li>Fixed issue in boolean indexing with ROC forced choice computation</li>\n\t<li>Fixed edge case bug in <code>fdr</code></li>\n\t<li><code>holm_bonf</code> behaves like <code>fdr</code> now and fixes incorrect pvalue bug</li>\n\t<li><code>check_numpy_square_matrix</code> validates properly now</li>\n\t<li>fixed issue in failed arma regression if <code>statsmodels</code> was not installed</li>\n\t<li>fixed issue in failed interactive plotting if <code>ipywidgets</code> was not installed</li>\n</ul>", 
  "author": [
    {
      "family": "Luke Chang"
    }, 
    {
      "family": "Eshin Jolly"
    }, 
    {
      "family": "Jin Hyun Cheong"
    }, 
    {
      "family": "Anton Burnashev"
    }, 
    {
      "family": "Andy Chen"
    }
  ], 
  "version": "0.3.11", 
  "type": "article", 
  "id": "2229813"
}