Software Open Access
Zeitvogel, Fabian
ScatterJn is a plugin for ImageJ and Fiji that allows for analysis and exploration of analytical microscocopy data. The plugin creates a scatterplot matrix from the grey values of several input images and offers different ways of classification. ScatterJn is partly based on the plugin ScatterJ (http://download.savannah.gnu.org/releases/scatterj/).
To install the plugin, copy the file ScatterJn_.class into the "plugins" subfolder of your ImageJ (or Fiji) folder. Then, install the plugin from ImageJ (or Fiji) using the "Plugins > Install..." command.
The plugin is published under GNU GPL v. 3, the example data under the Creative Commons Attribution 4.0 International Public License.
The plugin is described in the following publication:
F Zeitvogel, M Obst (2016), ScatterJn: An ImageJ Plugin for Scatterplot-Matrix Analysis and Classification of Spatially Resolved Analytical Microscopy Data, Journal of Open Research Software 4: e5, DOI: 10.5334/jors.89
which can be found at:
http://openresearchsoftware.metajnl.com/articles/10.5334/jors.89/
Name | Size | |
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ScatterJn_v1_0.tar.gz
md5:6d455b0e2bf94de043d08f2abbd30f73 |
1.2 MB | Download |
All versions | This version | |
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Views | 149 | 149 |
Downloads | 48 | 48 |
Data volume | 56.2 MB | 56.2 MB |
Unique views | 146 | 146 |
Unique downloads | 43 | 43 |