July 28, 2015 Software Open Access

Daniel Himmelstein; Casey Greene; Venkat Malladi; Frederic Bastian; Sergio Baranzini

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{
  "description": "<p>This project provides easy-to-use Gene Ontology annotations. Annotations relate GO Terms with Entrez Genes. We provide genes as Entrez GeneIDs and as symbols.</p>\n\n<p>Users choose from the following options:</p>\n\n<ul>\n\t<li>species: which species to retrieve annotations for</li>\n\t<li>evidence: whether to use all annotations or annotations from experimental evidence only</li>\n\t<li>propagation: whether to include only direct annotations or infer annotations based on ontology structure</li>\n</ul>\n\n<p>The project includes a website for browsing and downloading annotation files.</p>", 
  "license": "", 
  "creator": [
    {
      "@type": "Person", 
      "name": "Daniel Himmelstein"
    }, 
    {
      "@type": "Person", 
      "name": "Casey Greene"
    }, 
    {
      "@type": "Person", 
      "name": "Venkat Malladi"
    }, 
    {
      "@type": "Person", 
      "name": "Frederic Bastian"
    }, 
    {
      "@type": "Person", 
      "name": "Sergio Baranzini"
    }
  ], 
  "url": "https://zenodo.org/record/21711", 
  "codeRepository": "https://github.com/dhimmel/gene-ontology/tree/v1.0", 
  "datePublished": "2015-07-28", 
  "version": "v1.0", 
  "keywords": [
    "Gene Ontology", 
    "Annotations", 
    "Ontologies", 
    "Propagation", 
    "Rephetio"
  ], 
  "@context": "https://schema.org/", 
  "identifier": "https://doi.org/10.5281/zenodo.21711", 
  "@id": "https://doi.org/10.5281/zenodo.21711", 
  "@type": "SoftwareSourceCode", 
  "name": "gene-ontology: Initial zenodo release"
}