Set tip and internal node labels in a tree

PCMTreeSetLabels(tree, labels = as.character(1:PCMTreeNumNodes(tree)),
  inplace = TRUE)

Arguments

tree

a phylo object

labels

a character vector in the order 1:PCMTreeNumNodes(tree) as denoted in the tree$edge matrix.

inplace

a logical indicating if the change should be done in place on the object in the calling environment (in this case tree must not be a temporary object, e.g. returned by another function call). Default is TRUE.

Value

if inplace = FALSE, a copy of tree with set or modified tree$tip.label and tree$node.label, otherwise nothing.