Plot a tree with regimes
PCMTreePlot(tree, palette = PCMColorPalette(PCMTreeNumUniqueRegimes(tree), PCMTreeUniqueRegimes(tree)), ...)
tree | a phylo with set labels and regimes |
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palette | a named vector of colors corresponding to the regimes in tree |
... | Arguments passed to ggtree, e.g. layout = 'fan', open.angle = 8, size=.25. |
Currently, the ggtree package is not on CRAN and therefore it is not explicitly imported by PCMBase.