June 26, 2015 Software Open Access

Bradley Lowekamp; gabehart; Daniel Blezek; Luis Ibanez; Matt McCormick; Dave Chen; Dan Mueller; David Cole; Hans Johnson; Kasper Marstal; Richard Beare; Arnaud Gelas; Kent Williams; David Doria; Brad King

DataCite XML Export

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  <identifier identifierType="DOI">10.5281/zenodo.19049</identifier>
  <creators>
    <creator>
      <creatorName>Bradley Lowekamp</creatorName>
    </creator>
    <creator>
      <creatorName>gabehart</creatorName>
    </creator>
    <creator>
      <creatorName>Daniel Blezek</creatorName>
      <affiliation>Mayo Clinic</affiliation>
    </creator>
    <creator>
      <creatorName>Luis Ibanez</creatorName>
      <affiliation>Google, Inc.</affiliation>
    </creator>
    <creator>
      <creatorName>Matt McCormick</creatorName>
      <affiliation>Kitware, Inc</affiliation>
    </creator>
    <creator>
      <creatorName>Dave Chen</creatorName>
      <affiliation>NLM</affiliation>
    </creator>
    <creator>
      <creatorName>Dan Mueller</creatorName>
    </creator>
    <creator>
      <creatorName>David Cole</creatorName>
      <affiliation>Neocis, Inc.</affiliation>
    </creator>
    <creator>
      <creatorName>Hans Johnson</creatorName>
      <affiliation>The University of Iowa</affiliation>
    </creator>
    <creator>
      <creatorName>Kasper Marstal</creatorName>
    </creator>
    <creator>
      <creatorName>Richard Beare</creatorName>
    </creator>
    <creator>
      <creatorName>Arnaud Gelas</creatorName>
    </creator>
    <creator>
      <creatorName>Kent Williams</creatorName>
    </creator>
    <creator>
      <creatorName>David Doria</creatorName>
    </creator>
    <creator>
      <creatorName>Brad King</creatorName>
      <affiliation>Kitware, Inc.</affiliation>
    </creator>
  </creators>
  <titles>
    <title>SimpleElastix: SimpleElastix v0.9.0</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2015</publicationYear>
  <dates>
    <date dateType="Issued">2015-06-26</date>
  </dates>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/19049</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsSupplementTo">https://github.com/kaspermarstal/SimpleElastix/tree/v0.9.0-SimpleElastix</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.593764</relatedIdentifier>
  </relatedIdentifiers>
  <version>v0.9.0-SimpleElastix</version>
  <rightsList>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;SimpleElastix is a fork of SimpleITK that integrates elastix and transformix. The goal of SimpleElastix is to bring robust registration algorithms to a wider audience and make it easier to use elastix for e.g. Java-based enterprise applications or rapid Python prototyping. This package provides&lt;/p&gt;

&lt;ul&gt;
&lt;li&gt;elastix and transformix bindings for Python, Java, R, Ruby, Octave, Lua, Tcl and C# (see elastix manual for a list of supported registration algorithms).&lt;/li&gt;
&lt;li&gt;Installation, examples, usage and introductory material at simpleelastix.readthedocs.org.&lt;/li&gt;
&lt;li&gt;A user-friendly API that aligns with the design philosophy of SimpleITK, developed specifically for rapid prototyping and use in scripting languages.&lt;/li&gt;
&lt;li&gt;Pre-configured parameter files that should serve as good starting points for new users.&lt;/li&gt;
&lt;li&gt;A SuperBuild that automatically compiles and installs SimpleElastix and any dependencies.&lt;/li&gt;
&lt;li&gt;The complete set of SimpleITK image processing algorithms.&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;It is our hope that this package will lower the entry barrier for new elastix users and that it will be a useful alternative to scripting command line arguments in larger projects. If you experience any issues using SimpleElastix, pull requests and issues on Github are greatly appreciated.&lt;/p&gt;</description>
  </descriptions>
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