Dataset Open Access
{ "files": [ { "links": { "self": "https://zenodo.org/api/files/4582d9bf-7a31-4abd-8da8-963852bd4589/macrophage_combined_counts.txt" }, "checksum": "md5:a93781b31752b66de86d9a555d1e1b8a", "bucket": "4582d9bf-7a31-4abd-8da8-963852bd4589", "key": "macrophage_combined_counts.txt", "type": "txt", "size": 5188245 } ], "owners": [ 11899 ], "doi": "10.5281/zenodo.16739", "stats": { "version_unique_downloads": 43.0, "unique_views": 106.0, "views": 113.0, "version_views": 113.0, "unique_downloads": 43.0, "version_unique_views": 106.0, "volume": 254224005.0, "version_downloads": 49.0, "downloads": 49.0, "version_volume": 254224005.0 }, "links": { "doi": "https://doi.org/10.5281/zenodo.16739", "latest_html": "https://zenodo.org/record/16739", "bucket": "https://zenodo.org/api/files/4582d9bf-7a31-4abd-8da8-963852bd4589", "badge": "https://zenodo.org/badge/doi/10.5281/zenodo.16739.svg", "html": "https://zenodo.org/record/16739", "latest": "https://zenodo.org/api/records/16739" }, "created": "2015-04-10T19:02:19+00:00", "updated": "2020-01-24T19:25:02.708292+00:00", "conceptrecid": "609399", "revision": 10, "id": 16739, "metadata": { "access_right_category": "success", "doi": "10.5281/zenodo.16739", "description": "<p>This file contains raw RNA-Seq read counts from monocyte-derived macrophages (MDMs) and induced pluripotent stem cell-derived macrophages (IPSDMs) before and after 6 hours stimulation after LPS.</p>\n\n<p>The file was created using featureCounts. The first two columns are:</p>\n\n<ul>\n\t<li>gene_id: Ensembl 74 gene id.</li>\n\t<li>length: Length of the gene in bp.</li>\n</ul>\n\n<p>The MDM samples are:</p>\n\n<ul>\n\t<li>B1_ctrl</li>\n\t<li>B1_LPS</li>\n\t<li>B4_ctrl</li>\n\t<li>B4_LPS</li>\n\t<li>B5_ctrl</li>\n\t<li>B5_LPS</li>\n\t<li>B2_ctrl</li>\n\t<li>B2_LPS</li>\n\t<li>B3_ctrl</li>\n\t<li>B3_LPS</li>\n</ul>\n\n<p>The IPSDM samples are:</p>\n\n<ul>\n\t<li>CRL1_ctrl</li>\n\t<li>CRL1_LPS</li>\n\t<li>S7RE_ctrl</li>\n\t<li>S7RE_LPS</li>\n\t<li>FSPS10C_ctrl</li>\n\t<li>FSPS10C_LPS</li>\n\t<li>FSPS11B_ctrl</li>\n\t<li>FSPS11B_LPS</li>\n</ul>\n\n<p> </p>", "license": { "id": "CC-BY-4.0" }, "title": "RNA-Seq read counts from monocyte- and ips-derived macrophages", "relations": { "version": [ { "count": 1, "index": 0, "parent": { "pid_type": "recid", "pid_value": "609399" }, "is_last": true, "last_child": { "pid_type": "recid", "pid_value": "16739" } } ] }, "keywords": [ "RNA-Seq", "Macrophages", "ips cells", "lipopolysaccharide", "LPS" ], "publication_date": "2015-04-10", "creators": [ { "orcid": "0000-0002-1761-8881", "affiliation": "Wellcome Trust Sanger Institute", "name": "Alasoo, Kaur" } ], "access_right": "open", "resource_type": { "type": "dataset", "title": "Dataset" } } }
All versions | This version | |
---|---|---|
Views | 113 | 113 |
Downloads | 49 | 49 |
Data volume | 254.2 MB | 254.2 MB |
Unique views | 106 | 106 |
Unique downloads | 43 | 43 |