April 10, 2015 Dataset Open Access

Alasoo, Kaur

JSON Export

{
  "files": [
    {
      "links": {
        "self": "https://zenodo.org/api/files/4582d9bf-7a31-4abd-8da8-963852bd4589/macrophage_combined_counts.txt"
      }, 
      "checksum": "md5:a93781b31752b66de86d9a555d1e1b8a", 
      "bucket": "4582d9bf-7a31-4abd-8da8-963852bd4589", 
      "key": "macrophage_combined_counts.txt", 
      "type": "txt", 
      "size": 5188245
    }
  ], 
  "owners": [
    11899
  ], 
  "doi": "10.5281/zenodo.16739", 
  "stats": {
    "version_unique_downloads": 12.0, 
    "unique_views": 48.0, 
    "views": 48.0, 
    "downloads": 13.0, 
    "unique_downloads": 12.0, 
    "version_unique_views": 48.0, 
    "volume": 67447185.0, 
    "version_downloads": 13.0, 
    "version_views": 48.0, 
    "version_volume": 67447185.0
  }, 
  "links": {
    "doi": "https://doi.org/10.5281/zenodo.16739", 
    "latest_html": "https://zenodo.org/record/16739", 
    "bucket": "https://zenodo.org/api/files/4582d9bf-7a31-4abd-8da8-963852bd4589", 
    "badge": "https://zenodo.org/badge/doi/10.5281/zenodo.16739.svg", 
    "html": "https://zenodo.org/record/16739", 
    "latest": "https://zenodo.org/api/records/16739"
  }, 
  "created": "2015-04-10T19:02:19+00:00", 
  "updated": "2017-09-06T06:50:08.248404+00:00", 
  "conceptrecid": "609399", 
  "revision": 7, 
  "id": 16739, 
  "metadata": {
    "access_right_category": "success", 
    "doi": "10.5281/zenodo.16739", 
    "description": "<p>This file contains raw RNA-Seq read counts from monocyte-derived macrophages (MDMs)&nbsp;and induced pluripotent stem cell-derived macrophages (IPSDMs)&nbsp;before and after 6 hours stimulation after LPS.</p>\n\n<p>The file was created using featureCounts.&nbsp;The first two columns are:</p>\n\n<ul>\n\t<li>gene_id: Ensembl 74 gene id.</li>\n\t<li>length: Length of the gene in bp.</li>\n</ul>\n\n<p>The MDM samples are:</p>\n\n<ul>\n\t<li>B1_ctrl</li>\n\t<li>B1_LPS</li>\n\t<li>B4_ctrl</li>\n\t<li>B4_LPS</li>\n\t<li>B5_ctrl</li>\n\t<li>B5_LPS</li>\n\t<li>B2_ctrl</li>\n\t<li>B2_LPS</li>\n\t<li>B3_ctrl</li>\n\t<li>B3_LPS</li>\n</ul>\n\n<p>The IPSDM samples are:</p>\n\n<ul>\n\t<li>CRL1_ctrl</li>\n\t<li>CRL1_LPS</li>\n\t<li>S7RE_ctrl</li>\n\t<li>S7RE_LPS</li>\n\t<li>FSPS10C_ctrl</li>\n\t<li>FSPS10C_LPS</li>\n\t<li>FSPS11B_ctrl</li>\n\t<li>FSPS11B_LPS</li>\n</ul>\n\n<p>&nbsp;</p>", 
    "license": {
      "id": "CC-BY-4.0"
    }, 
    "title": "RNA-Seq read counts from monocyte- and ips-derived macrophages", 
    "relations": {
      "version": [
        {
          "count": 1, 
          "index": 0, 
          "parent": {
            "pid_type": "recid", 
            "pid_value": "609399"
          }, 
          "is_last": true, 
          "last_child": {
            "pid_type": "recid", 
            "pid_value": "16739"
          }
        }
      ]
    }, 
    "keywords": [
      "RNA-Seq", 
      "Macrophages", 
      "ips cells", 
      "lipopolysaccharide", 
      "LPS"
    ], 
    "publication_date": "2015-04-10", 
    "creators": [
      {
        "affiliation": "Wellcome Trust Sanger Institute", 
        "name": "Alasoo, Kaur"
      }
    ], 
    "access_right": "open", 
    "resource_type": {
      "type": "dataset", 
      "title": "Dataset"
    }
  }
}