Dataset Open Access
<?xml version='1.0' encoding='utf-8'?> <resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4.1/metadata.xsd"> <identifier identifierType="DOI">10.5281/zenodo.16739</identifier> <creators> <creator> <creatorName>Alasoo, Kaur</creatorName> <givenName>Kaur</givenName> <familyName>Alasoo</familyName> <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-1761-8881</nameIdentifier> <affiliation>Wellcome Trust Sanger Institute</affiliation> </creator> </creators> <titles> <title>RNA-Seq read counts from monocyte- and ips-derived macrophages</title> </titles> <publisher>Zenodo</publisher> <publicationYear>2015</publicationYear> <subjects> <subject>RNA-Seq</subject> <subject>Macrophages</subject> <subject>ips cells</subject> <subject>lipopolysaccharide</subject> <subject>LPS</subject> </subjects> <dates> <date dateType="Issued">2015-04-10</date> </dates> <resourceType resourceTypeGeneral="Dataset"/> <alternateIdentifiers> <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/16739</alternateIdentifier> </alternateIdentifiers> <rightsList> <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights> <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights> </rightsList> <descriptions> <description descriptionType="Abstract"><p>This file contains raw RNA-Seq read counts from monocyte-derived macrophages (MDMs)&nbsp;and induced pluripotent stem cell-derived macrophages (IPSDMs)&nbsp;before and after 6 hours stimulation after LPS.</p> <p>The file was created using featureCounts.&nbsp;The first two columns are:</p> <ul> <li>gene_id: Ensembl 74 gene id.</li> <li>length: Length of the gene in bp.</li> </ul> <p>The MDM samples are:</p> <ul> <li>B1_ctrl</li> <li>B1_LPS</li> <li>B4_ctrl</li> <li>B4_LPS</li> <li>B5_ctrl</li> <li>B5_LPS</li> <li>B2_ctrl</li> <li>B2_LPS</li> <li>B3_ctrl</li> <li>B3_LPS</li> </ul> <p>The IPSDM samples are:</p> <ul> <li>CRL1_ctrl</li> <li>CRL1_LPS</li> <li>S7RE_ctrl</li> <li>S7RE_LPS</li> <li>FSPS10C_ctrl</li> <li>FSPS10C_LPS</li> <li>FSPS11B_ctrl</li> <li>FSPS11B_LPS</li> </ul> <p>&nbsp;</p></description> </descriptions> </resource>
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