Dataset Open Access

SophiaBeads Dataset Project

Coban, S. B.; McDonald, S. A.


DataCite XML Export

<?xml version='1.0' encoding='utf-8'?>
<resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://datacite.org/schema/kernel-3" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd">
  <identifier identifierType="DOI">10.5281/zenodo.16474</identifier>
  <creators>
    <creator>
      <creatorName>Coban, S. B.</creatorName>
      <affiliation>University of Manchester</affiliation>
    </creator>
    <creator>
      <creatorName>McDonald, S. A.</creatorName>
      <affiliation>University of Manchester</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Sophiabeads Dataset Project</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2015</publicationYear>
  <subjects>
    <subject>computed tomography</subject>
    <subject>x-ray</subject>
    <subject>cone beam</subject>
    <subject>reconstruction algorithms</subject>
    <subject>sophiabeads-dataset</subject>
    <subject>segmentation</subject>
    <subject>data correction</subject>
    <subject>large dataset</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2015-03-30</date>
  </dates>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/16474</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsCitedBy">10.5281/zenodo.16539</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="Cites">10.5281/zenodo.16539</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by-sa/4.0/">Creative Commons Attribution Share-Alike 4.0</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;&lt;strong&gt;SophiaBeads Dataset&lt;/strong&gt;&amp;nbsp;are acquired specifically for testing and comparing reconstruction methods for x-ray computed tomography.&amp;nbsp;The sample is a&amp;nbsp;plastic tube with a diameter of 25mm, filled with uniform&amp;nbsp;Soda-Lime Glass (SiO2-Na2O) beads of diameters 2.5mm (with&amp;nbsp;standard deviation 0.1mm). The sample has been scanned in the same conditions for each dataset, where the number of projections is halved after each batch scan&amp;nbsp;(starting from 2048,&amp;nbsp;down to 64 projections). This allows us to&amp;nbsp;understand the effects of fewer projections, and develop algorithms that deliver quality results when the information content is low&amp;nbsp;(i.e. faster scans or lower dose).&amp;nbsp;&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;These dataset&amp;nbsp;are also suitable for developing and/or testing&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;segmentation methods,&lt;/li&gt;
	&lt;li&gt;image or data&amp;nbsp;correction techniques (e.g. centre of rotation),&lt;/li&gt;
	&lt;li&gt;forward and back project implementations, and&lt;/li&gt;
	&lt;li&gt;benchmarking user&amp;rsquo;s own code/method.&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;For the reconstruction and quantification examples, please see (will&amp;nbsp;update with link&amp;nbsp;to paper!)&lt;/p&gt;

&lt;p&gt;To use&amp;nbsp;these datasets for own research, please follow the technical report available via (http://eprints.ma.man.ac.uk/2290/), and the GitHub&amp;nbsp;repository (http://sophilyplum.github.io/sophiabeads-datasets/). If publishing work with these datasets, &lt;strong&gt;the reader must cite&amp;nbsp;the dataset&amp;nbsp;&lt;em&gt;and&lt;/em&gt; the codes separately&lt;/strong&gt;.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;The dataset&amp;nbsp;are taken using the &lt;em&gt;Nikon Custom Bay&lt;/em&gt; machine (using a cone-beam geometry), located in the Manchester Xray Imaging Facility (www.mxif.manchester.ac.uk/resources/imaging-systems/nikon-custom-bay), by Sophia B. Coban and Samuel A. McDonald.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;Contact details for authors:&amp;nbsp;&lt;/p&gt;

&lt;p&gt;Sophia B.&amp;nbsp;Coban:&amp;nbsp;&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;email: sophia.coban@manchester.ac.uk&lt;/li&gt;
	&lt;li&gt;website: www.maths.manchester.ac.uk/~scoban&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;Samuel A. McDonald:&amp;nbsp;&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;email:&amp;nbsp;sam.mcdonald@manchester.ac.uk&lt;/li&gt;
	&lt;li&gt;website:&amp;nbsp;http://www.mxif.manchester.ac.uk/index.php/component/comprofiler/userprofile/mclijsm2&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;SophiaBeads Dataset&amp;nbsp;Project Codes (DOI): https://zenodo.org/record/16539&lt;/p&gt;</description>
  </descriptions>
</resource>

Share

Cite as