Published October 19, 2016
| Version v1
Dataset
Open
RDF Representation of RNA Metabolism Evolution data - version 3 (diagrammed in https://zenodo.org/deposit/47641/)
- 1. CBGP-UPM/INIA
Description
Version 3 (replaces http://doi.org/10.5281/zenodo.50496)
Protein complexes involved in RNA Metabolism; individual proteins and their orthologues through a wide range of fungal species spanning much of the kingdom (using yeast as the primary seed for orthology search, and using the EMBL-EBI orthologue database to identify orthologues). For each family of orthologues, the protein domain structure is determined, and then the presence/absence of that domain is evaluated in each of the species. The data is presented in RDF, and is visualized in the form of Heat Maps in http://doi.org/10.5281/zenodo.47641
Files
orthologues.txt
Files
(9.1 MB)
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Additional details
Related works
- Is cited by
- 10.7717/peerj-cs.110 (DOI)
- Is new version of
- 10.5281/zenodo.50496 (DOI)
- 10.5281/zenodo.161685 (DOI)
- Is supplement to
- 10.5281/zenodo.47641 (DOI)
References
- Toni Gabaldón, Christophe Dessimoz, Julie Huxley-Jones, Albert J Vilella, Erik LL Sonnhammer and Suzanna Lewis,Joining forces in the quest for orthologs. Genome Biology10:403 (2009) - DOI: 10.1186/gb-2009-10-9-403 Published: 29 September 2009